Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67576 Canola extracellular 21.23 96.04
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 86.43 93.82
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 75.05 76.22
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 70.68 73.41
Bra011260.1-P Field mustard endoplasmic reticulum 59.74 62.33
PGSC0003DMT400076024 Potato cytosol, nucleus 28.88 49.62
KRH52641 Soybean endoplasmic reticulum 47.05 48.21
KRH61982 Soybean endoplasmic reticulum 45.3 47.37
Solyc08g074290.2.1 Tomato nucleus 45.3 46.52
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 43.76 44.54
Solyc08g006030.2.1 Tomato unclear 42.01 43.34
Os09t0497700-01 Rice plasma membrane 41.36 42.38
Bra024012.1-P Field mustard mitochondrion 58.21 42.36
PGSC0003DMT400038486 Potato endoplasmic reticulum 42.45 41.81
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 9.41 41.35
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 36.98 41.02
Zm00001d029841_P001 Maize cytosol 20.13 40.89
GSMUA_Achr10P... Banana endoplasmic reticulum 39.61 40.67
Os08t0519400-01 Rice plasma membrane 39.61 40.04
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 39.61 39.78
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 38.29 39.41
Zm00001d024398_P001 Maize cytosol 11.38 39.39
Solyc05g010750.2.1 Tomato cytosol 10.72 38.89
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 37.42 38.6
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 38.07 38.5
TraesCS7A01G253000.2 Wheat golgi 37.42 37.83
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.64 37.64
Zm00001d031532_P001 Maize plasma membrane 37.2 37.53
Zm00001d049764_P001 Maize plasma membrane 37.42 37.5
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.64 37.47
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 37.2 37.2
Zm00001d005407_P001 Maize extracellular 22.98 36.84
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 36.54 36.38
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 8.75 33.61
Zm00001d006052_P004 Maize endoplasmic reticulum 35.89 33.27
HORVU5Hr1G074800.2 Barley plastid 36.54 31.39
Os04t0607150-00 Rice vacuole 24.07 30.14
TraesCS2D01G428600.1 Wheat golgi, vacuole 26.48 28.88
TraesCS2B01G451900.1 Wheat golgi, vacuole 26.48 28.74
TraesCS2A01G430700.2 Wheat golgi, vacuole 26.26 28.17
Bra011163.1-P Field mustard plasma membrane 22.32 27.79
KXG27068 Sorghum plasma membrane 22.76 26.6
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 26.7 26.46
Bra001871.1-P Field mustard cytosol 10.5 17.45
Protein Annotations
EnsemblPlants:Bra007856.1EnsemblPlants:Bra007856.1-PEnsemblPlantsGene:Bra007856Gene3D:1.20.120.20ncoils:CoilPANTHER:PTHR34360
PANTHER:PTHR34360:SF1SEG:segSignalP:SignalP-noTMSUPFAM:SSF57997UniParc:UPI0002542D7DUniProt:M4CUG1
MapMan:35.2:::::
Description
AT2G24420 (E=3e-151) | DNA repair ATPase-related
Coordinates
chrA09:-:31259731..31262256
Molecular Weight (calculated)
52711.5 Da
IEP (calculated)
10.046
GRAVY (calculated)
-0.659
Length
457 amino acids
Sequence
(BLAST)
001: MAVAKVVALL LLFSLVLTTG VFSDEEPTTT PGSASEIQLE QLHAKIHTLE SQVEEKRREV KEREETVTEK EKLLKERQDK VSSLETELSS LREKGSSESV
101: QLLEKAQARA TELEKQVEVL KNFLEQKNKE KESTEARTSE AEKKLNELNS RLDKLHKTKE EQKNKIRKLE RALKISEEEM LRMRHEAATK ARELQEVHGS
201: WLPHWLAVHW VHFQTVAGPH WDAHGKPVLE KVTQKVTQAK TQAERWAEPH MVNVKTVSNL QAMYLMTPMR ALMIMLMKSY MQKYIPAVKE TVKTHVEPHV
301: QTLSTKAKEA YHASKSAVTP HIVKFQAHVD PYYQEAKKFS KPYVDQVATA TKPHADKAIH YYKEFLKSAT TYHDQVQANV ERKLKSHELT APFATKEFIW
401: FAVLHFSLVY KDTPYLISTK LTFSLLCVVG CSTKTKKPTR HSHQHGRRKA KRAHFDK
Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.