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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 90.44 94.65
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 77.33 79.09
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 76.22 75.05
Bra011260.1-P Field mustard endoplasmic reticulum 64.22 65.98
KRH52641 Soybean endoplasmic reticulum 50.89 51.35
PGSC0003DMT400076024 Potato cytosol, nucleus 30.22 51.13
KRH61982 Soybean endoplasmic reticulum 49.11 50.57
Zm00001d029841_P001 Maize cytosol 25.11 50.22
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 48.22 48.33
Solyc08g074290.2.1 Tomato nucleus 47.56 48.09
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 42.44 46.36
Solyc08g006030.2.1 Tomato unclear 45.56 46.28
Os09t0497700-01 Rice plasma membrane 45.11 45.52
GSMUA_Achr10P... Banana endoplasmic reticulum 44.22 44.72
Bra024012.1-P Field mustard mitochondrion 62.22 44.59
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 43.56 44.14
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 43.33 44.02
PGSC0003DMT400038486 Potato endoplasmic reticulum 45.33 43.97
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 44.0 43.52
Zm00001d005407_P001 Maize extracellular 27.56 43.51
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 43.11 42.92
Os08t0519400-01 Rice plasma membrane 42.89 42.7
TraesCS7A01G253000.2 Wheat golgi 42.67 42.48
Zm00001d049764_P001 Maize plasma membrane 42.89 42.32
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 9.56 41.35
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.78 41.14
Zm00001d031532_P001 Maize plasma membrane 41.33 41.06
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 41.11 40.48
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 41.11 40.3
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.67 39.87
Solyc05g010750.2.1 Tomato cytosol 10.89 38.89
Zm00001d024398_P001 Maize cytosol 11.11 37.88
Zm00001d006052_P004 Maize endoplasmic reticulum 40.0 36.51
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 9.56 36.13
HORVU5Hr1G074800.2 Barley plastid 39.33 33.27
Os04t0607150-00 Rice vacuole 26.0 32.05
Bra011163.1-P Field mustard plasma membrane 24.67 30.25
TraesCS2D01G428600.1 Wheat golgi, vacuole 27.78 29.83
TraesCS2B01G451900.1 Wheat golgi, vacuole 27.33 29.22
TraesCS2A01G430700.2 Wheat golgi, vacuole 27.33 28.87
KXG27068 Sorghum plasma membrane 24.89 28.64
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 27.11 26.46
Bra001871.1-P Field mustard cytosol 10.67 17.45
Protein Annotations
EnsemblPlants:Bra032096.1EnsemblPlants:Bra032096.1-PEnsemblPlantsGene:Bra032096Gene3D:1.20.5.1230GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI000254499BUniProt:M4ETG5MapMan:35.2:
Description
AT2G24420 (E=2e-140) | DNA repair ATPase-related
Coordinates
chrA04:+:10934226..10937014
Molecular Weight (calculated)
51861.7 Da
IEP (calculated)
10.386
GRAVY (calculated)
-0.644
Length
450 amino acids
Sequence
(BLAST)
001: MAAAKLVALL LLFLFVFTTG EERTSAGSVD SASEIQLDQL NAKIRALESQ IDEKSREVKG REELVADKDK LLHERQDKLS SLETQLSSLM KKGSSDSVQV
101: LEKAKAKATE LEKQVEVLRN FLEQKNKEKE STEARRSEAD KKLNKLNSRL EKIYVHICVL FYANINKKVL QLHKTKEEQK GKIRKLERAL KISEEEMLRM
201: RHEAATKARE LQEVHGSWLP HWLAVHWVHF QTVAGTHWDA HGKPVMEKVT QKVTQAKTQA EKWAEPHMVN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE
301: AYHASKSAVT PHIVKFQEHV DPYYQGAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTKKA VHYYKEFLKT ATTYHHQVQA NIERKLKSHE LAAPFATKEF
401: IWFTASALLA LPIFVVYKFL CSLFCTKTKK PTRHSHRHAR RRAKRDHSDK
Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.