Factsheet for VIT_04s0008g02720.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52641	Soybean	endoplasmic reticulum	62.58	63.0
KRH61982	Soybean	endoplasmic reticulum	60.58	62.24
Solyc08g006030.2.1	Tomato	unclear	55.01	55.76
GSMUA_Achr10P...	Banana	endoplasmic reticulum	54.79	55.28
HORVU7Hr1G052350.1	Barley	cytosol, plasma membrane	50.56	55.1
PGSC0003DMT400076024	Potato	cytosol, nucleus	32.52	54.89
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	53.67	54.28
Solyc08g074290.2.1	Tomato	nucleus	53.67	54.16
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	53.01	54.09
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	53.23	53.95
PGSC0003DMT400038486	Potato	endoplasmic reticulum	55.68	53.88
AT4G31340.1	Thale cress	endoplasmic reticulum	51.89	53.32
Bra011260.1-P	Field mustard	endoplasmic reticulum	51.45	52.74
Os08t0519400-01	Rice	plasma membrane	53.01	52.65
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	50.56	52.18
CDY28257	Canola	endoplasmic reticulum	50.56	51.83
TraesCS7A01G253000.2	Wheat	golgi	51.89	51.55
Zm00001d024398_P001	Maize	cytosol	15.14	51.52
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	51.67	51.33
CDX68735	Canola	endoplasmic reticulum	50.33	51.13
Os09t0497700-01	Rice	plasma membrane	50.78	51.12
Zm00001d029841_P001	Maize	cytosol	25.61	51.11
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	48.33	50.47
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	48.11	50.23
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	50.11	49.45
Zm00001d049764_P001	Maize	plasma membrane	50.11	49.34
Solyc05g010750.2.1	Tomato	cytosol	13.81	49.21
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.88	48.93
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	48.33	48.22
Zm00001d031532_P001	Maize	plasma membrane	48.33	47.9
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	47.22	46.39
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	47.22	46.19
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	46.77	45.95
Zm00001d005407_P001	Maize	extracellular	28.95	45.61
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	46.55	45.53
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.47	45.19
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	44.54	43.76
Zm00001d006052_P004	Maize	endoplasmic reticulum	43.65	39.76
HORVU5Hr1G074800.2	Barley	plastid	45.21	38.16
HORVU2Hr1G002290.5	Barley	endoplasmic reticulum, extracellular	9.8	36.97
Bra024012.1-P	Field mustard	mitochondrion	50.11	35.83
CDY13424	Canola	plasma membrane	50.11	34.88
Os04t0607150-00	Rice	vacuole	26.06	32.05
TraesCS2D01G428600.1	Wheat	golgi, vacuole	29.62	31.74
TraesCS2B01G451900.1	Wheat	golgi, vacuole	29.18	31.12
TraesCS2A01G430700.2	Wheat	golgi, vacuole	28.73	30.28
CDY67576	Canola	extracellular	6.46	28.71
KXG27068	Sorghum	plasma membrane	24.28	27.88
HORVU2Hr1G100500.17	Barley	endoplasmic reticulum, golgi, mitochondrion, nucleus	28.06	27.33

Protein Annotations

EntrezGene:100254151	wikigene:100254151	MapMan:35.2	ProteinID:CBI20790	ProteinID:CBI20790.3	ncoils:Coil
UniProt:D7SU41	EMBL:FN595231	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100254151
wikigene:LOC100254151	PANTHER:PTHR34360	PANTHER:PTHR34360:SF1	SUPFAM:SSF58113	SignalP:SignalP-noTM	TIGR:TC60270
TMHMM:TMhelix	UniParc:UPI00015C8347	ArrayExpress:VIT_04s0008g02720	EnsemblPlantsGene:VIT_04s0008g02720	EnsemblPlants:VIT_04s0008g02720.t01	unigene:Vvi.12593
RefSeq:XP_002280828	RefSeq:XP_002280828.1	RefSeq:XP_010648443.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:2257759..2263564

Molecular Weight (calculated)

51349.0 Da

IEP (calculated)

9.999

GRAVY (calculated)

-0.611

Length

449 amino acids

Sequence
(BLAST)

001: MGASKLATLF IFFALIFCKI RADASIDEVD QPQGVVLSES SESEALKIEL ALLQEKIQTL ETHIDERSKE LKSKDEIIAQ KEKIVQEKSN SITQLQNEIV
101: SLQKKGTSDA EEQLGKAYAR ASELEKQVDK LKKEIETQQK EKAALESRAN EAERKTRELN SKVESLKKIT DEQKTRIRKT ERALQVAEEE MMKAKFDANS
201: KTKELMEVHG AWLPPWFANH LISCQSFMEV HWNKHGKPAL DTLTQKALEK KAQAQKWSEP HVETFKTKWI PAIKDQWLEI TTYLEPHVQL LCTKTVEAYE
301: ASKNAITPHV IKVQEFGDPY FQVAKKVSKP YIDQVAAVTK PHVDNVKVAL KPYTKKVVRG YGKFLKSATT YHQKVQDTVQ EKLKNHELTK PLATKELVWF
401: AASALLALPI IFLFRICSAI FCKKAKKPIR NGHTNHHPRR KPKRGHPDK

Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)

001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK

Arabidopsis Description

AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.