Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076024 | Potato | cytosol, nucleus | 72.12 | 28.2 |
| CDY67576 | Canola | extracellular | 22.12 | 22.77 |
| Zm00001d024398_P001 | Maize | cytosol | 26.92 | 21.21 |
| Solyc08g074290.2.1 | Tomato | nucleus | 75.0 | 17.53 |
| Solyc08g006030.2.1 | Tomato | unclear | 50.96 | 11.96 |
| AT4G31340.1 | Thale cress | endoplasmic reticulum | 47.12 | 11.21 |
| VIT_04s0008g02720.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 45.19 | 10.47 |
| CDY34774 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.31 | 10.45 |
| CDX72304 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.27 | 10.34 |
| KRH61982 | Soybean | endoplasmic reticulum | 43.27 | 10.3 |
| CDY46149 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.31 | 10.23 |
| KRH52641 | Soybean | endoplasmic reticulum | 43.27 | 10.09 |
| AT2G24420.1 | Thale cress | endoplasmic reticulum, vacuole | 41.35 | 9.77 |
| CDY28257 | Canola | endoplasmic reticulum | 40.38 | 9.59 |
| Bra032096.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 41.35 | 9.56 |
| CDY20313 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 39.42 | 9.53 |
| CDX68735 | Canola | endoplasmic reticulum | 40.38 | 9.5 |
| Bra007856.1-P | Field mustard | endoplasmic reticulum, vacuole | 41.35 | 9.41 |
| Bra011260.1-P | Field mustard | endoplasmic reticulum | 39.42 | 9.36 |
| Os08t0519400-01 | Rice | plasma membrane | 39.42 | 9.07 |
| GSMUA_Achr6P01760_001 | Banana | endoplasmic reticulum | 38.46 | 9.01 |
| HORVU7Hr1G052350.1 | Barley | cytosol, plasma membrane | 35.58 | 8.98 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 37.5 | 8.76 |
| Os09t0497700-01 | Rice | plasma membrane | 37.5 | 8.74 |
| Solyc07g008970.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 36.54 | 8.72 |
| TraesCS7B01G149500.2 | Wheat | endoplasmic reticulum | 37.5 | 8.63 |
| Os04t0607150-00 | Rice | vacuole | 29.81 | 8.49 |
| TraesCS7A01G253000.2 | Wheat | golgi | 36.54 | 8.41 |
| OQU89720 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 36.54 | 8.28 |
| Zm00001d031532_P001 | Maize | plasma membrane | 35.58 | 8.17 |
| KXG25592 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 35.58 | 8.13 |
| GSMUA_Achr9P13940_001 | Banana | endoplasmic reticulum | 34.62 | 8.13 |
| Zm00001d049764_P001 | Maize | plasma membrane | 35.58 | 8.11 |
| TraesCS5A01G275800.2 | Wheat | endoplasmic reticulum | 32.69 | 7.44 |
| TraesCS5B01G275100.2 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.69 | 7.44 |
| TraesCS5D01G283100.2 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.73 | 7.19 |
| Zm00001d006052_P004 | Maize | endoplasmic reticulum | 33.65 | 7.1 |
| Bra024012.1-P | Field mustard | mitochondrion | 42.31 | 7.01 |
| CDY13424 | Canola | plasma membrane | 42.31 | 6.82 |
| HORVU5Hr1G074800.2 | Barley | plastid | 31.73 | 6.2 |
| KXG27068 | Sorghum | plasma membrane | 23.08 | 6.14 |
| TraesCS2B01G451900.1 | Wheat | golgi, vacuole | 24.04 | 5.94 |
| TraesCS2D01G428600.1 | Wheat | golgi, vacuole | 23.08 | 5.73 |
| TraesCS2A01G430700.2 | Wheat | golgi, vacuole | 22.12 | 5.4 |
| HORVU2Hr1G100500.17 | Barley | endoplasmic reticulum, golgi, mitochondrion, nucleus | 21.15 | 4.77 |
| Zm00001d005407_P001 | Maize | extracellular | 3.85 | 1.4 |
| HORVU2Hr1G002290.5 | Barley | endoplasmic reticulum, extracellular | 0.96 | 0.84 |
| Solyc05g010750.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| Zm00001d029841_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc05g010760.1.1 | EnsemblPlantsGene:Solyc05g010760.1 | ncoils:Coil | PANTHER:PTHR34360 | PANTHER:PTHR34360:SF1 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI00027671E8 | UniProt:K4BXP8 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5:-:4953700..4954223
Molecular Weight (calculated)
11905.3 Da
IEP (calculated)
5.980
GRAVY (calculated)
-0.746
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFLSSMLFF PCVVRQFCNK SNIEETARAL KGKDEVIADK ENIIKEKSLS SELSSLQKKG TLDSEEQVGK SRAQADQLEK QVERLKEEVE MKNKEKRDLE
101: AHIG
101: AHIG
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.