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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
 nucleus: 21132161
endoplasmic reticulum: 27224218
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH52641 Soybean endoplasmic reticulum 95.65 93.72
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 62.24 60.58
PGSC0003DMT400076024 Potato cytosol, nucleus 33.87 55.64
AT4G31340.1 Thale cress endoplasmic reticulum 54.0 54.0
Bra011260.1-P Field mustard endoplasmic reticulum 54.0 53.88
CDY28257 Canola endoplasmic reticulum 53.78 53.65
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 49.89 52.91
CDX68735 Canola endoplasmic reticulum 53.32 52.71
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 52.17 52.41
Zm00001d029841_P001 Maize cytosol 26.77 52.0
Solyc08g006030.2.1 Tomato unclear 52.63 51.92
GSMUA_Achr10P... Banana endoplasmic reticulum 52.63 51.69
Solyc08g074290.2.1 Tomato nucleus 52.63 51.69
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 50.8 51.63
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 51.95 51.59
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 50.57 51.4
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 52.17 51.35
Os08t0519400-01 Rice plasma membrane 51.95 50.22
PGSC0003DMT400038486 Potato endoplasmic reticulum 53.32 50.22
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 50.8 50.11
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 48.05 49.88
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 50.57 49.11
Os09t0497700-01 Rice plasma membrane 50.11 49.1
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 51.03 49.01
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 50.57 48.89
TraesCS7A01G253000.2 Wheat golgi 50.57 48.89
Zm00001d031532_P001 Maize plasma membrane 48.97 47.24
Zm00001d049764_P001 Maize plasma membrane 49.2 47.15
Zm00001d024398_P001 Maize cytosol 13.96 46.21
Zm00001d005407_P001 Maize extracellular 29.98 45.96
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 47.37 45.3
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 46.68 44.44
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 45.77 43.57
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 45.54 43.54
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 10.3 43.27
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 44.85 42.89
Solyc05g010750.2.1 Tomato cytosol 11.9 41.27
Zm00001d006052_P004 Maize endoplasmic reticulum 44.62 39.55
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 10.76 39.5
HORVU5Hr1G074800.2 Barley plastid 43.94 36.09
Bra024012.1-P Field mustard mitochondrion 51.26 35.67
CDY67576 Canola extracellular 8.24 35.64
CDY13424 Canola plasma membrane 51.26 34.73
Os04t0607150-00 Rice vacuole 25.4 30.41
TraesCS2D01G428600.1 Wheat golgi, vacuole 27.23 28.4
TraesCS2B01G451900.1 Wheat golgi, vacuole 27.0 28.03
TraesCS2A01G430700.2 Wheat golgi, vacuole 27.23 27.93
KXG27068 Sorghum plasma membrane 23.34 26.09
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 25.86 24.51
Protein Annotations
EMBL:ACUP02002204EnsemblPlants:KRH61982EnsemblPlantsGene:GLYMA_04G078500Gene3D:1.20.5.1230Gene3D:1.20.5.170GO:GO:0005575
GO:GO:0016020GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1ProteinID:KRH61982
ProteinID:KRH61982.1SignalP:SignalP-noTMSUPFAM:SSF57997SUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI000295D1DB
UniProt:I1JUQ4MapMan:35.2::::
Description
hypothetical protein
Coordinates
chr4:+:6574883..6580598
Molecular Weight (calculated)
49498.5 Da
IEP (calculated)
9.815
GRAVY (calculated)
-0.583
Length
437 amino acids
Sequence
(BLAST)
001: MAPPKLFVFA LSVTLIFAIV GAEADVSVEG ATPEPDTSAI KIQLDQLNSK IQILESQISE KLEEVKKKDK IIAEKENSIE DKSITIQSLQ NEIASLQKKG
101: SLDAEEQVGK AHARAGELQK QVDKLKRELE TQNKEKVNWE TRVPELENKI HDLNSKLEDL QKINEEQKTK IQKSERALKV AEEEMLKAKF EATAIEKELR
201: EAHGAWLPPW LAVHYIHSKS FVDSHWNKHG KPALEMVTQK ALEKKAQAGK WAEPHVETIK TWSVVKTNAE PHVQLLTTKT VEVYEASKNA ISPHLSKAKE
301: VVDPYYQEAR KFSKPYIDQI AIAAKPHVDK VQEVLKPYTK EVVRVYGKFL ESATTYHRQV QASVQETLKK HELTRPLATK ELEWFAASAL LALPIVLMAR
401: VFSAVFCSKK VSKPARNGNT HHARRKPKRG HLDKHTT
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.