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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g006030.2.1 Tomato unclear 89.44 93.68
PGSC0003DMT400076024 Potato cytosol, nucleus 37.5 65.41
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 53.88 55.68
KRH52641 Soybean endoplasmic reticulum 51.72 53.81
KRH61982 Soybean endoplasmic reticulum 50.22 53.32
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 48.49 51.14
Zm00001d029841_P001 Maize cytosol 24.14 49.78
AT4G31340.1 Thale cress endoplasmic reticulum 46.12 48.97
Os08t0519400-01 Rice plasma membrane 47.41 48.67
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 43.1 48.54
Bra011260.1-P Field mustard endoplasmic reticulum 45.69 48.4
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 44.61 48.14
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 47.2 48.13
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 44.4 47.91
CDX68735 Canola endoplasmic reticulum 45.47 47.74
CDY28257 Canola endoplasmic reticulum 45.04 47.72
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 44.61 47.59
TraesCS7A01G253000.2 Wheat golgi 46.12 47.35
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 42.89 47.27
GSMUA_Achr10P... Banana endoplasmic reticulum 45.26 47.19
Zm00001d049764_P001 Maize plasma membrane 45.47 46.27
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 45.04 46.24
Os09t0497700-01 Rice plasma membrane 44.4 46.19
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.97 45.33
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 43.1 45.05
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 42.46 44.47
Zm00001d031532_P001 Maize plasma membrane 43.32 44.37
Zm00001d005407_P001 Maize extracellular 26.29 42.81
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 42.03 42.48
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 41.81 42.45
Zm00001d024398_P001 Maize cytosol 12.07 42.42
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.59 42.23
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.16 41.61
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 40.95 41.58
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 38.58 40.41
Zm00001d006052_P004 Maize endoplasmic reticulum 39.44 37.12
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 9.27 36.13
HORVU5Hr1G074800.2 Barley plastid 40.3 35.15
Bra024012.1-P Field mustard mitochondrion 44.83 33.12
CDY13424 Canola plasma membrane 44.83 32.25
Os04t0607150-00 Rice vacuole 25.0 31.78
CDY67576 Canola extracellular 6.68 30.69
TraesCS2A01G430700.2 Wheat golgi, vacuole 26.29 28.64
TraesCS2B01G451900.1 Wheat golgi, vacuole 25.86 28.5
TraesCS2D01G428600.1 Wheat golgi, vacuole 25.43 28.16
KXG27068 Sorghum plasma membrane 23.28 27.62
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 24.14 24.3
Protein Annotations
EnsemblPlants:PGSC0003DMT400038486EnsemblPlantsGene:PGSC0003DMG400014854EntrezGene:102599957Gene3D:1.20.5.1230Gene3D:1.20.5.340GO:GO:0005575
GO:GO:0016020GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1PGSC:PGSC0003DMG400014854
SEG:segSignalP:SignalP-noTMSUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI0002968581UniProt:M1B6Y4
MapMan:35.2:::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014854]
Coordinates
chr8:+:2642123..2650108
Molecular Weight (calculated)
52229.0 Da
IEP (calculated)
7.604
GRAVY (calculated)
-0.366
Length
464 amino acids
Sequence
(BLAST)
001: MASSMRLIFF TLLVFIALIF TQIKAEAEVK SVDDEVEVVK SHVSTSAELD HLKSKIQSLE SNVKDAATEL KQKDEVIAGK EEMIKEKSES IASLLAQISS
101: LQEKGSLDAE EKVKKAHARV DQLEKQVETL KKEVDMKNKE KKDLGTQINE AEQRVTELNS KVEKLQKTVD EQEAKLRKTE RALQIAEEEM IRARSEATSK
201: AQQLGELDFD ESSYMPGTMS FSFLKIQVHG AWLPPWLAVQ LTHFQFLLEK HGKPAMDIVI QKATEKKALA ETWAAPHVET IKTQWIPVAK EKWLVISTTA
301: EPHVQLLTTR ALEIYETSKG AITPHILKVQ ELATPHVQEI KKFSKPYIDD VAAAAKPHVE KVRVAAKPYT EVAVHHYGKF LESATTYHNQ LQGTVKETLE
401: NHDLTKSLAT KELIWFAASA LLALPIIILF KFLSAIFCTK AKESDHSVNS PNSRRKAKRG HPDM
Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.