CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G31340.1	Thale cress	endoplasmic reticulum	82.53	82.15
CDY28257	Canola	endoplasmic reticulum	82.53	81.96
CDX68735	Canola	endoplasmic reticulum	82.53	81.22
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	67.36	68.14
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	67.13	67.91
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	64.37	66.51
CDY13424	Canola	plasma membrane	89.43	60.31
CDY67576	Canola	extracellular	12.41	53.47
KRH52641	Soybean	endoplasmic reticulum	53.56	52.24
KRH61982	Soybean	endoplasmic reticulum	52.41	52.17
PGSC0003DMT400076024	Potato	cytosol, nucleus	31.72	51.88
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	52.18	50.56
Solyc08g074290.2.1	Tomato	nucleus	48.97	47.87
Solyc08g006030.2.1	Tomato	unclear	47.82	46.95
HORVU7Hr1G052350.1	Barley	cytosol, plasma membrane	43.91	46.36
GSMUA_Achr10P...	Banana	endoplasmic reticulum	46.9	45.84
Zm00001d029841_P001	Maize	cytosol	23.68	45.78
Os09t0497700-01	Rice	plasma membrane	45.98	44.84
PGSC0003DMT400038486	Potato	endoplasmic reticulum	47.59	44.61
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	45.29	44.37
Os08t0519400-01	Rice	plasma membrane	45.29	43.58
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.34	43.27
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	45.06	43.08
TraesCS7A01G253000.2	Wheat	golgi	44.14	42.48
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	44.14	42.48
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	42.99	42.21
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	43.45	41.18
TraesCS5B01G275100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	42.99	40.92
Zm00001d049764_P001	Maize	plasma membrane	42.76	40.79
Zm00001d005407_P001	Maize	extracellular	26.67	40.7
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	42.53	40.48
Solyc05g010750.2.1	Tomato	cytosol	11.49	39.68
Zm00001d031532_P001	Maize	plasma membrane	41.15	39.51
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	41.15	39.0
Zm00001d024398_P001	Maize	cytosol	11.03	36.36
Zm00001d006052_P004	Maize	endoplasmic reticulum	40.92	36.11
HORVU5Hr1G074800.2	Barley	plastid	42.07	34.4
HORVU2Hr1G002290.5	Barley	endoplasmic reticulum, extracellular	9.2	33.61
Os04t0607150-00	Rice	vacuole	26.67	31.78
CDY12172	Canola	cytosol	6.9	30.0
CDY43554	Canola	plasma membrane	26.21	29.38
CDX68621	Canola	plasma membrane	25.98	29.2
TraesCS2B01G451900.1	Wheat	golgi, vacuole	28.05	28.98
TraesCS2D01G428600.1	Wheat	golgi, vacuole	27.82	28.88
TraesCS2A01G430700.2	Wheat	golgi, vacuole	28.05	28.64
KXG27068	Sorghum	plasma membrane	23.91	26.6
HORVU2Hr1G100500.17	Barley	endoplasmic reticulum, golgi, mitochondrion, nucleus	26.44	24.95
CDX92946	Canola	cytosol	10.34	16.3
CDY24314	Canola	mitochondrion	5.75	13.02

Protein Annotations

EnsemblPlants:CDX72304	EnsemblPlantsGene:GSBRNA2T00099787001	Gene3D:1.20.5.1230	GO:A0A078C7Y1	ncoils:Coil	PANTHER:PTHR34360
PANTHER:PTHR34360:SF1	ProteinID:CDX72304	ProteinID:CDX72304.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF57997
SUPFAM:SSF58113	TMHMM:TMhelix	UniParc:UPI0004EC7D9D	MapMan:35.2	:	:

Description

BnaC07g43260D

Coordinates

chrLK031796:+:554253..557368

Molecular Weight (calculated)

48928.4 Da

IEP (calculated)

9.232

GRAVY (calculated)

-0.496

Length

435 amino acids

Sequence
(BLAST)

001: MAAAKLVALL LLAFVFTTTV FSDDEPETFD AAGSDGSSKI QLDQLNAKIH ALESQIDEKA REVKGKDELV AEKEKLLKEK EDKIASLQTG VSSLQGSSDS
101: AKRLGKVQAR VVELEKQVEV LRNFLEQKNK EKTSTEARTK EAEKKLTELN SSLDKLEKTN EEQMKEIGKL ERAIKIAEEE ILRTKHEASS KTNELLEAHG
201: SWLPPWLAVH CISIQAYTET HWEAHGKPAV DTVILKVTEA KTQAVKWAEP HVKNAKTKYI PAIKGTVATH VEPHVRTLSI KAKEAYHASK SAVSPHIVTV
301: QEIVDPYYQE AKKFSKPYFD QVATATKPHV DNVKVAMKPY TTKVIIVYTE FLESATTYHN QVQAHVEQRL KSHELTEAFA TNEFVWFAAS ALLALPIFFA
401: YRVLSSLFCT NTKKPVTHPH HHGRRKTKRS HHTDK

Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)

001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK

Arabidopsis Description

AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.