Factsheet for Zm00001d029841_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005407_P001	Maize	extracellular	96.89	76.49
Zm00001d049764_P001	Maize	plasma membrane	98.67	48.68
HORVU2Hr1G002290.5	Barley	endoplasmic reticulum, extracellular	25.33	47.9
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	86.67	42.86
Zm00001d031532_P001	Maize	plasma membrane	84.0	41.72
HORVU7Hr1G052350.1	Barley	cytosol, plasma membrane	74.67	40.78
Solyc05g010750.2.1	Tomato	cytosol	22.67	40.48
Os08t0519400-01	Rice	plasma membrane	79.56	39.6
TraesCS7A01G253000.2	Wheat	golgi	75.56	37.61
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	75.11	37.39
CDY12172	Canola	cytosol	13.78	31.0
KRH52641	Soybean	endoplasmic reticulum	55.11	27.8
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	54.67	27.7
GSMUA_Achr10P...	Banana	endoplasmic reticulum	53.78	27.19
Zm00001d006052_P004	Maize	endoplasmic reticulum	59.11	26.98
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	52.89	26.86
KRH61982	Soybean	endoplasmic reticulum	52.0	26.77
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.33	25.81
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	51.11	25.61
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	48.89	25.58
Solyc08g074290.2.1	Tomato	nucleus	50.22	25.39
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	50.22	25.11
Solyc08g006030.2.1	Tomato	unclear	48.89	24.83
CDY28257	Canola	endoplasmic reticulum	47.56	24.43
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	47.56	24.32
Bra011260.1-P	Field mustard	endoplasmic reticulum	47.11	24.2
PGSC0003DMT400038486	Potato	endoplasmic reticulum	49.78	24.14
AT4G31340.1	Thale cress	endoplasmic reticulum	46.67	24.03
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.78	23.68
CDX68735	Canola	endoplasmic reticulum	46.22	23.53
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.11	23.04
PGSC0003DMT400076024	Potato	cytosol, nucleus	25.33	21.43
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	40.89	20.13
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	38.22	19.72
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	37.78	19.19
Bra011163.1-P	Field mustard	plasma membrane	30.22	18.53
CDX68621	Canola	plasma membrane	31.56	18.35
CDY43554	Canola	plasma membrane	31.11	18.04
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	29.78	17.27
Bra024012.1-P	Field mustard	mitochondrion	45.78	16.4
CDY13424	Canola	plasma membrane	45.78	15.97
Bra001871.1-P	Field mustard	cytosol	13.33	10.91
CDX92946	Canola	cytosol	13.33	10.87
CDY24314	Canola	mitochondrion	3.56	4.17
Zm00001d024398_P001	Maize	cytosol	0.89	1.52
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0
CDY67576	Canola	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d029841_P001	EnsemblPlants:Zm00001d029841_T001	EnsemblPlantsGene:Zm00001d029841	Gene3D:1.20.120.20	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR34360	PANTHER:PTHR34360:SF4	ProteinID:ONL99693.1	SEG:seg	SUPFAM:SSF58113
TMHMM:TMhelix	UniParc:UPI000842A6B5	UniProt:A0A1D6K827	MapMan:35.2	:	:

Description

myosin heavy chain-related

Coordinates

chr1:-:89617721..89620070

Molecular Weight (calculated)

25897.3 Da

IEP (calculated)

10.596

GRAVY (calculated)

-0.608

Length

225 amino acids

Sequence
(BLAST)

001: MEVVSGHWNY HGKPVVQNVL HKASEKSAHA KKWAEPHIET AKMKWIPVKE KLVVLKKNAE PYVQKVSTRS VEFYESSRDA VTPHVVKVKE FAHPYYQEAK
101: KFSKPYIDQI AEITKPHVEK VRTTLKPYTK RAVHAYGSFL ASATTYHRQA QATIMDYLHQ HGVPKSLATK ELVWFLASAL LALPVFVIYR LVVETFCTKK
201: NRRPRGGNGN GNHGQKRHKR RYADK

Best Arabidopsis Sequence Match ( AT2G24420.1 )
(BLAST)

001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK

Arabidopsis Description

AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.