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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:nucleus
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92946 Canola cytosol 99.27 98.91
Bra011163.1-P Field mustard plasma membrane 22.91 17.17
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 7.27 16.81
Zm00001d029841_P001 Maize cytosol 10.91 13.33
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 21.45 13.32
Os09t0497700-01 Rice plasma membrane 21.09 13.0
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 20.73 12.87
Solyc07g008970.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 20.36 12.84
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 18.91 12.62
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 20.0 12.39
GSMUA_Achr10P... Banana endoplasmic reticulum 20.0 12.36
Zm00001d005407_P001 Maize extracellular 12.73 12.28
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 20.0 11.98
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 20.0 11.98
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 19.64 11.87
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 19.64 11.82
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 19.64 11.82
Zm00001d031532_P001 Maize plasma membrane 18.91 11.48
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 18.55 11.28
TraesCS7A01G253000.2 Wheat golgi 18.18 11.06
Os08t0519400-01 Rice plasma membrane 17.82 10.84
Zm00001d049764_P001 Maize plasma membrane 17.82 10.75
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 17.45 10.67
Zm00001d024398_P001 Maize cytosol 5.09 10.61
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 17.45 10.5
HORVU5Hr1G074800.2 Barley plastid 19.27 9.96
Bra011260.1-P Field mustard endoplasmic reticulum 15.64 9.82
TraesCS2D01G428600.1 Wheat golgi, vacuole 14.91 9.79
TraesCS2B01G451900.1 Wheat golgi, vacuole 14.91 9.74
Zm00001d006052_P004 Maize endoplasmic reticulum 17.45 9.74
TraesCS2A01G430700.2 Wheat golgi, vacuole 14.91 9.62
Os04t0607150-00 Rice vacuole 12.36 9.32
KXG27068 Sorghum plasma membrane 13.09 9.21
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 13.45 8.03
Bra024012.1-P Field mustard mitochondrion 16.73 7.32
Protein Annotations
EnsemblPlants:Bra001871.1EnsemblPlants:Bra001871.1-PEnsemblPlantsGene:Bra001871PANTHER:PTHR34360PANTHER:PTHR34360:SF1UniParc:UPI00025406C9
UniProt:M4CCE1MapMan:35.2::::
Description
AT4G30090 (E=4e-018) emb1353 | emb1353 (embryo defective 1353)
Coordinates
chrA03:+:19081668..19083395
Molecular Weight (calculated)
32449.8 Da
IEP (calculated)
10.132
GRAVY (calculated)
-0.305
Length
275 amino acids
Sequence
(BLAST)
001: MVFLRKKSYR AIDFYQAENL MIHASESEEK VYEIQQQLKR SLEVETLPKF ADKKVAKQNK LENIDGNWFL SKLGLNLNKT QAYLMTLWQQ HLSPTPQKKW
101: IPSIKDKSVA LTTYLEPKIH YLTVKSIEVL YTSKQVLTPA LIKGFDVSYS YLEIYGKWFL SKLGLNLNKT QTYLMTLWQQ HLSLALEKKW IPSIKDASLT
201: TYLERKLHYL SDKSIEVLYT AMRVLTPDLI QEFDVSYYYL QVNRVMTIAK LHLKKGTSFL RVMYRKRKAW LQEVG
Best Arabidopsis Sequence Match ( AT4G30090.1 )
(BLAST)
001: MAFFKLLLFL FLVTLQIASF TGNGEASSSS SENNGCNGDQ NHLLNELKST VSALQSIIKE KNQELLSKEE KIRGLELYIR EKPYLFESEI DFSQFENPVK
101: HASEVEEKVY ELQKQVFGLK REVETQRKRR LEVEAELADK KVAQLSSKLE NIDGWFLSKL GLNPTESQAY LMTLWHQHLS PTLHTTLQMV SMKIEQVQKW
201: SEPHIETLNS QWIPSIKDAC VTITIYLEPK VQYITDKSIE LLYTSKQALT PHLIQGFDAS YYYLEVIRTH THPYTTRIMT LTKPHLERVQ VALEPYTENV
301: RHGFQKLVNS TKIYHQQAQE MLKNNEITKP VATMDLAWVG ATALIGFPLI FIIKLLSAVS NPKGKKRHNH KKEPTTGYRR AKRRHPHQ
Arabidopsis Description
Golgin family A protein [Source:UniProtKB/TrEMBL;Acc:F4JPI4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.