Factsheet for TraesCS5B01G275100.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	97.81	97.81
TraesCS5D01G283100.2	Wheat	endoplasmic reticulum, extracellular, plasma membrane	91.68	91.29
HORVU5Hr1G074800.2	Barley	plastid	86.21	74.06
Os09t0497700-01	Rice	plasma membrane	66.52	68.16
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	65.43	65.14
Zm00001d024398_P001	Maize	cytosol	18.6	64.39
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	58.42	59.07
Zm00001d006052_P004	Maize	endoplasmic reticulum	58.42	54.16
GSMUA_Achr10P...	Banana	endoplasmic reticulum	48.8	50.11
PGSC0003DMT400076024	Potato	cytosol, nucleus	29.1	50.0
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	46.17	47.52
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	46.39	47.22
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	45.3	46.73
KRH52641	Soybean	endoplasmic reticulum	45.51	46.64
AT4G31340.1	Thale cress	endoplasmic reticulum	44.42	46.45
KRH61982	Soybean	endoplasmic reticulum	43.54	45.54
Solyc05g010750.2.1	Tomato	cytosol	12.47	45.24
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	42.45	44.09
CDY28257	Canola	endoplasmic reticulum	42.23	44.06
Solyc08g074290.2.1	Tomato	nucleus	42.67	43.82
CDX68735	Canola	endoplasmic reticulum	42.01	43.44
Bra011260.1-P	Field mustard	endoplasmic reticulum	41.58	43.38
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.92	42.99
Solyc08g006030.2.1	Tomato	unclear	41.58	42.89
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.26	42.79
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	39.39	41.86
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	41.14	41.78
PGSC0003DMT400038486	Potato	endoplasmic reticulum	42.23	41.59
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.42	40.62
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	38.07	39.91
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	38.29	39.5
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	37.64	37.64
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.44	32.69
CDY12172	Canola	cytosol	7.0	32.0
Bra011163.1-P	Field mustard	plasma membrane	25.6	31.88
TraesCS2B01G451900.1	Wheat	golgi, vacuole	29.32	31.83
CDY43554	Canola	plasma membrane	26.91	31.7
CDX68621	Canola	plasma membrane	26.26	31.01
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	25.38	29.9
Bra024012.1-P	Field mustard	mitochondrion	40.92	29.78
CDY13424	Canola	plasma membrane	40.92	28.99
CDY67576	Canola	extracellular	5.03	22.77
Bra001871.1-P	Field mustard	cytosol	11.82	19.64
CDX92946	Canola	cytosol	11.82	19.57
CDY24314	Canola	mitochondrion	3.5	8.33

Protein Annotations

EnsemblPlants:TraesCS5B01G275100.2	EnsemblPlantsGene:TraesCS5B01G275100	Gene3D:1.20.120.20	ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF4
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF58113	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr5B:+:461131908..461137134

Molecular Weight (calculated)

50680.2 Da

IEP (calculated)

9.830

GRAVY (calculated)

-0.437

Length

457 amino acids

Sequence
(BLAST)

001: MRIPGLLAAA GPLLVLLLAV AGAAAQEAAA AGDVRPEEIA ANARAQEEAV LAAELGQLRA KVAALESSIA AQTLELNSKD GGIETLEKVT GEMSQNIATL
101: QNEITSLQSK GSIAAKEQAG KVNARAIELE KQIEKLKKDI EAQNNKKATM EARAADAEKK VQELNAKLDR LQKTSGEQKV RIQKTKNALK AAEEELMKVQ
201: LEATAKSEQL GEVHGAWLPP WLAAHAAHYM ELMSSHWSEH GKPAVNNLLQ KASEKTVQAK EWAEPHIETV KAKWIPVIKE NWATAKKKAE PYVQMVSAKS
301: VELYQASKDA ISPHVVKAHE LADPYFQEAK KLSKPYIDQV AKASKPHVDK LKTTLKPYTE KAGQEYEKLR ETATLYHQQA QVTILDYMHQ HELLKQFANG
401: ELVWFLAAAW LLMPVYVLYI LLTEVFCITK KKKIPRSDKG KVLVNGHRRH KRRHADK

Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)

001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK

Arabidopsis Description

AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.