Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 92.79 92.79
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 81.4 83.14
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 79.77 77.95
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 67.91 67.13
CDY28257 Canola endoplasmic reticulum 67.91 66.67
CDX68735 Canola endoplasmic reticulum 67.91 66.06
CDY67576 Canola extracellular 14.88 63.37
KRH52641 Soybean endoplasmic reticulum 53.49 51.57
KRH61982 Soybean endoplasmic reticulum 51.63 50.8
PGSC0003DMT400076024 Potato cytosol, nucleus 31.4 50.75
Zm00001d029841_P001 Maize cytosol 25.58 48.89
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 50.23 48.11
Solyc08g074290.2.1 Tomato nucleus 48.84 47.19
Solyc08g006030.2.1 Tomato unclear 48.14 46.73
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 44.65 46.6
PGSC0003DMT400038486 Potato endoplasmic reticulum 48.14 44.61
GSMUA_Achr10P... Banana endoplasmic reticulum 45.58 44.04
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 45.35 44.02
Os09t0497700-01 Rice plasma membrane 45.58 43.95
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 45.12 43.69
CDY13424 Canola plasma membrane 65.12 43.41
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 45.58 43.36
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 45.81 43.3
TraesCS7A01G253000.2 Wheat golgi 45.35 43.14
Os08t0519400-01 Rice plasma membrane 45.35 43.14
Zm00001d005407_P001 Maize extracellular 28.37 42.81
Zm00001d049764_P001 Maize plasma membrane 43.72 41.23
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 43.49 40.74
Zm00001d031532_P001 Maize plasma membrane 42.79 40.62
Solyc05g010750.2.1 Tomato cytosol 11.63 39.68
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 9.53 39.42
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.86 39.39
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.4 38.78
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 41.16 38.73
Zm00001d024398_P001 Maize cytosol 11.86 38.64
Zm00001d006052_P004 Maize endoplasmic reticulum 41.86 36.51
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 10.0 36.13
HORVU5Hr1G074800.2 Barley plastid 40.7 32.89
Os04t0607150-00 Rice vacuole 27.21 32.05
CDY12172 Canola cytosol 7.44 32.0
TraesCS2D01G428600.1 Wheat golgi, vacuole 29.53 30.31
TraesCS2B01G451900.1 Wheat golgi, vacuole 29.3 29.93
CDY43554 Canola plasma membrane 26.51 29.38
TraesCS2A01G430700.2 Wheat golgi, vacuole 29.07 29.34
CDX68621 Canola plasma membrane 26.05 28.94
KXG27068 Sorghum plasma membrane 26.05 28.64
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 28.14 26.25
CDX92946 Canola cytosol 10.93 17.03
CDY24314 Canola mitochondrion 5.81 13.02
Protein Annotations
EnsemblPlants:CDY20313EnsemblPlantsGene:GSBRNA2T00012246001Gene3D:1.20.120.20GO:A0A078G6N5GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1ProteinID:CDY20313ProteinID:CDY20313.1
SEG:segSignalP:SignalP-noTMSUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI0004EEED37UniProt:A0A078G6N5
MapMan:35.2:::::
Description
BnaC04g36430DBnaC04g36430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6N5]
Coordinates
chrLK032105:+:537408..541092
Molecular Weight (calculated)
49852.9 Da
IEP (calculated)
10.236
GRAVY (calculated)
-0.692
Length
430 amino acids
Sequence
(BLAST)
001: MAAAKLVALL LLFLFVFTTG VFSDAGEEPT SASEIQLDQL NAKIRALESQ IDEKSREVKG REELVAEMDK LLHERQDKLS SLEAQLSSLR KKGSSDSVEV
101: LEKAKTRATE LEKQVEVLRN FLEQKNKEKE STEARSNEAE KKLNELNSRL EKLHRTKEEQ KGKIRKLERA LKISEEEMLR MRHEAATKAR ELQEVHASWL
201: PHWLAVHWVH FQTVSWTHWD AHGKPVMDKV TQKVTQAKTQ AEKWAEPHMV NVKTKYIPAI KETVKTHVEP HVQTLSTKAK EAYHASKSAV TPHIVKFQEH
301: VDPYYQEAKK FSKPYVDQVA TATKPHVDKV RATMKPYTKK AVYYYKEFLK SATTYHHQVQ ANVERKLKSH ELAAPFATKE FIWFVASALL ALPIFIVYKF
401: LCSLFWQTKK PARHSHRHAR RRAKRDHSDK
Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.