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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029841_P001 Maize cytosol 42.86 86.67
Zm00001d049764_P001 Maize plasma membrane 86.15 85.96
Zm00001d031532_P001 Maize plasma membrane 80.66 81.02
Zm00001d005407_P001 Maize extracellular 46.59 74.39
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 66.81 73.79
Os08t0519400-01 Rice plasma membrane 71.87 72.35
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 69.67 70.13
TraesCS7A01G253000.2 Wheat golgi 69.45 69.91
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 62.86 62.31
GSMUA_Achr10P... Banana endoplasmic reticulum 53.85 55.06
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 52.53 53.83
PGSC0003DMT400076024 Potato cytosol, nucleus 30.99 53.01
KRH52641 Soybean endoplasmic reticulum 51.43 52.47
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 13.41 51.26
KRH61982 Soybean endoplasmic reticulum 49.01 51.03
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 49.45 50.79
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 49.45 50.11
Solyc08g006030.2.1 Tomato unclear 47.47 48.76
PGSC0003DMT400038486 Potato endoplasmic reticulum 48.13 47.2
AT4G31340.1 Thale cress endoplasmic reticulum 45.27 47.14
Solyc08g074290.2.1 Tomato nucleus 45.49 46.52
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 44.84 46.36
CDY28257 Canola endoplasmic reticulum 44.4 46.12
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 43.52 46.05
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 43.3 45.81
CDX68735 Canola endoplasmic reticulum 44.4 45.7
Bra011260.1-P Field mustard endoplasmic reticulum 43.96 45.66
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 43.08 45.06
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 41.1 44.42
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.52 44.0
Solyc05g010750.2.1 Tomato cytosol 11.87 42.86
Solyc07g008970.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 39.56 41.28
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 39.34 40.41
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 39.78 39.61
CDY12172 Canola cytosol 8.13 37.0
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 8.13 35.58
CDX68621 Canola plasma membrane 28.35 33.33
Bra011163.1-P Field mustard plasma membrane 26.81 33.24
CDY43554 Canola plasma membrane 28.13 32.99
AT4G30090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 27.69 32.47
Bra024012.1-P Field mustard mitochondrion 42.86 31.05
CDY13424 Canola plasma membrane 42.86 30.23
CDY67576 Canola extracellular 6.37 28.71
KXG27068 Sorghum plasma membrane 23.52 27.37
Bra001871.1-P Field mustard cytosol 11.87 19.64
CDX92946 Canola cytosol 11.87 19.57
CDY24314 Canola mitochondrion 4.4 10.42
Protein Annotations
EnsemblPlants:KXG25592EnsemblPlantsGene:SORBI_3007G201800Gene3D:1.20.5.1230Gene3D:1.20.5.340GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF4ProteinID:KXG25592ProteinID:KXG25592.1
SEG:segSignalP:SignalP-noTMSUPFAM:SSF57997SUPFAM:SSF58113TMHMM:TMhelixUniParc:UPI0001C80DBD
UniProt:A0A1B6PIT8MapMan:35.2::::
Description
hypothetical protein
Coordinates
chr7:-:63270947..63275705
Molecular Weight (calculated)
50713.8 Da
IEP (calculated)
9.960
GRAVY (calculated)
-0.484
Length
455 amino acids
Sequence
(BLAST)
001: MGISRPLAAL VLALLIAVAG ATAEEPVVEA DSLAGAVEAA AALRTEEAAE AAALRAELGQ LQAKISALES DIAERSQVLK NKDDAIANLE KAIETKSKTI
101: ASLQGEIASL QAKGSVAAEE EASKANARAI ELEKQIDKLK KDIEAQNSQK AALESRANNA EKKVEELNEK LNAIQKESDE RKRKIKKTER ALKVAEEELM
201: RLQLEATAKA KQLTEVHGAW LPPWLAAQYA HYVEVVSGYW NQHGKPAVHN VLHKASEKSA QAKKWAEPHI ETAKTKWIPV KEKLVVLKKN AEPYVQKVST
301: RSVELYESSR DAVTPHVVKV KEFVHPYYQE AKMFSKPYID QIAEITKPHV EKVRTTLKPY TKRAVHAYGS FLESATTYHR QAQASIMDYL HQHDITKSFA
401: TKELVWFLAS ALLALPVFII YRLLVETFCT KKNKRPRGGN GNHGHKRQKR RHADK
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.