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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
golgi: 25047511
plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029841_P001 Maize cytosol 39.6 79.56
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 69.69 76.46
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 74.56 74.56
TraesCS7A01G253000.2 Wheat golgi 73.67 73.67
Zm00001d049764_P001 Maize plasma membrane 72.57 71.93
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 72.35 71.87
Zm00001d031532_P001 Maize plasma membrane 69.47 69.32
Zm00001d005407_P001 Maize extracellular 42.48 67.37
Os09t0497700-01 Rice plasma membrane 65.49 66.37
PGSC0003DMT400076024 Potato cytosol, nucleus 33.41 56.77
GSMUA_Achr10P... Banana endoplasmic reticulum 55.09 55.96
KRH52641 Soybean endoplasmic reticulum 52.65 53.36
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 52.65 53.01
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 13.94 52.94
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 51.77 52.7
KRH61982 Soybean endoplasmic reticulum 50.22 51.95
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 50.22 51.24
Solyc08g006030.2.1 Tomato unclear 48.89 49.89
Solyc08g074290.2.1 Tomato nucleus 48.89 49.66
AT4G31340.1 Thale cress endoplasmic reticulum 46.02 47.6
PGSC0003DMT400038486 Potato endoplasmic reticulum 48.67 47.41
CDY28257 Canola endoplasmic reticulum 45.13 46.58
Bra011260.1-P Field mustard endoplasmic reticulum 44.69 46.12
CDX68735 Canola endoplasmic reticulum 44.69 45.7
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 43.36 45.58
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 43.14 45.35
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 43.58 45.29
Solyc05g010750.2.1 Tomato cytosol 12.61 45.24
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 44.03 45.23
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 40.71 43.71
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.7 42.89
Solyc07g008970.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 41.15 42.66
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 39.38 40.18
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 40.04 39.61
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 9.07 39.42
CDY12172 Canola cytosol 7.96 36.0
CDY67576 Canola extracellular 7.3 32.67
Os04t0607150-00 Rice vacuole 25.89 32.05
Bra011163.1-P Field mustard plasma membrane 25.89 31.88
CDY43554 Canola plasma membrane 26.99 31.44
CDX68621 Canola plasma membrane 26.77 31.27
Bra024012.1-P Field mustard mitochondrion 43.36 31.21
AT4G30090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 26.77 31.19
CDY13424 Canola plasma membrane 43.36 30.39
Bra001871.1-P Field mustard cytosol 10.84 17.82
CDX92946 Canola cytosol 10.84 17.75
CDY24314 Canola mitochondrion 4.2 9.9
Protein Annotations
EnsemblPlants:Os08t0519400-01EnsemblPlantsGene:Os08g0519400EntrezGene:4346056Gene3D:1.20.120.20Gene3D:1.20.5.1160GO:GO:0005575
GO:GO:0016020GO:GO:0016021ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF4ProteinID:BAD09693.1
ProteinID:BAF24173.1ProteinID:BAT06277.1RefSeq:XP_015651095.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF58113
TMHMM:TMhelixUniParc:UPI000023AEDEUniProt:Q6ZBK6MapMan:35.2::
Description
brassinosteroid receptor kinase (BRI1)-interacting protein 129, BRI1-interacting protein 129, brassinosteroid receptor kinase-interacting protein 129Apolipoprotein/apolipophorin domain containing protein. (Os08t0519400-01)
Coordinates
chr8:-:25799139..25804041
Molecular Weight (calculated)
50860.2 Da
IEP (calculated)
10.028
GRAVY (calculated)
-0.556
Length
452 amino acids
Sequence
(BLAST)
001: MGRISRLLLL LAAAVVLVIA TGVAAQEEAA EAVVEVEEGI VERAKEEAEA VALRAELQQL RDKISGLESG ISERSKELKA KDDSIAKLEK LIEEKSQKIA
101: SLQSEITSLQ AKGSVAAEEQ AGKANARAVE LEKQIDKLKK DVEAQSVKKA TLENRANDAE KRVQELNAKI DALQKTNDEQ KRKLQSTERA LKVAEEELMR
201: LHLEATTKSK QLTEVHGAWL PPWLAAHSAH YMEVISGHWN EHGKPAINSF LQKASEKSAQ AKKWAEPHVE TAKMKWVPVK EKLVVLKKNT EPYVQKVSSK
301: SVEVYEASRD AVKPHVAKVK EFADPYFQEA KKFSKPYIDQ VAEVTKPHVE KVRTTLKPYT KRAVRVYGSF LESATTYHRQ AQSTILDYLH QHEVSKSLAT
401: KELVWFLASA LLAIPVYIIY RLLMEAFCKK PKRPPHGGNH GHRRHKRRHA DK
Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)
001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK
Arabidopsis Description
AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.