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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g010760.1.1 Tomato endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 28.2 72.12
Solyc08g074290.2.1 Tomato nucleus 90.23 53.93
Zm00001d024398_P001 Maize cytosol 21.8 43.94
PGSC0003DMT400038486 Potato endoplasmic reticulum 65.41 37.5
Solyc05g010750.2.1 Tomato cytosol 16.92 35.71
AT4G31340.1 Thale cress endoplasmic reticulum 56.77 34.55
HORVU7Hr1G052350.1 Barley cytosol, plasma membrane 53.01 34.22
KRH61982 Soybean endoplasmic reticulum 55.64 33.87
KRH52641 Soybean endoplasmic reticulum 56.39 33.63
Os08t0519400-01 Rice plasma membrane 56.77 33.41
CDY46149 Canola endoplasmic reticulum, extracellular, plasma membrane 52.63 32.56
VIT_04s0008g02720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 54.89 32.52
AT2G24420.1 Thale cress endoplasmic reticulum, vacuole 53.38 32.27
Bra011260.1-P Field mustard endoplasmic reticulum 52.63 31.96
TraesCS7B01G149500.2 Wheat endoplasmic reticulum 54.14 31.86
CDY28257 Canola endoplasmic reticulum 52.26 31.74
CDX72304 Canola endoplasmic reticulum, plasma membrane, vacuole 51.88 31.72
TraesCS7A01G253000.2 Wheat golgi 53.38 31.42
CDY20313 Canola endoplasmic reticulum, plasma membrane, vacuole 50.75 31.4
Os09t0497700-01 Rice plasma membrane 52.63 31.39
GSMUA_Achr10P... Banana endoplasmic reticulum 52.26 31.24
CDX68735 Canola endoplasmic reticulum 51.88 31.22
CDY34774 Canola endoplasmic reticulum, extracellular, plasma membrane 49.25 31.12
KXG25592 Sorghum endoplasmic reticulum, golgi, plasma membrane 53.01 30.99
GSMUA_Achr9P13940_001 Banana endoplasmic reticulum 51.13 30.7
Bra032096.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 51.13 30.22
OQU89720 Sorghum endoplasmic reticulum, extracellular, plasma membrane 51.88 30.07
Zm00001d049764_P001 Maize plasma membrane 51.5 30.04
Zm00001d031532_P001 Maize plasma membrane 50.75 29.8
GSMUA_Achr6P01760_001 Banana endoplasmic reticulum 49.25 29.5
TraesCS5B01G275100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.0 29.1
TraesCS5D01G283100.2 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.0 28.98
Bra007856.1-P Field mustard endoplasmic reticulum, vacuole 49.62 28.88
TraesCS5A01G275800.2 Wheat endoplasmic reticulum 49.25 28.67
Zm00001d006052_P004 Maize endoplasmic reticulum 51.13 27.59
Zm00001d029841_P001 Maize cytosol 21.43 25.33
HORVU5Hr1G074800.2 Barley plastid 49.62 24.81
Zm00001d005407_P001 Maize extracellular 26.32 24.56
PGSC0003DMT400073989 Potato extracellular, plasma membrane, vacuole 39.85 23.93
Os04t0607150-00 Rice vacuole 32.71 23.84
CDY67576 Canola extracellular 8.27 21.78
Bra024012.1-P Field mustard mitochondrion 51.13 21.66
CDY13424 Canola plasma membrane 51.13 21.09
TraesCS2B01G451900.1 Wheat golgi, vacuole 29.7 18.76
TraesCS2D01G428600.1 Wheat golgi, vacuole 28.95 18.38
TraesCS2A01G430700.2 Wheat golgi, vacuole 29.32 18.31
HORVU2Hr1G100500.17 Barley endoplasmic reticulum, golgi, mitochondrion, nucleus 28.2 16.27
KXG27068 Sorghum plasma membrane 22.93 15.6
HORVU2Hr1G002290.5 Barley endoplasmic reticulum, extracellular 6.77 15.13
Protein Annotations
EnsemblPlants:PGSC0003DMT400076024EnsemblPlantsGene:PGSC0003DMG400029563ncoils:CoilPANTHER:PTHR34360PANTHER:PTHR34360:SF1PGSC:PGSC0003DMG400029563
UniParc:UPI000296774DUniProt:M1CW28MapMan:35.2:::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029563]
Coordinates
chr8:+:45153186..45158545
Molecular Weight (calculated)
30672.2 Da
IEP (calculated)
8.242
GRAVY (calculated)
-0.701
Length
266 amino acids
Sequence
(BLAST)
001: ESNIEETARA LKGKDEAIAD KENIIKEMSE KIKSLSTELA SLQKKGTLNS EEQVGKARAL ADQLEKQVEI LKEEVEMKNK EKRDFEAHIG ETEKRVLELN
101: LKVDKLEKTV DKQKEKLKKT ERALKLAEEE MIRARLEATL KMKELMEVHG AWLPRWLEVH MTHYKSLLEK HWQEHGKPAM DTMIQKAVEK KAQAEVWVAP
201: HIETVKTELK KFSKPYIDQV ATATKPHVEK VCIAVKPYTD VAVHHYGKFL ESATVYHSQV CENKVI
Best Arabidopsis Sequence Match ( AT2G24420.1 )
(BLAST)
001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK
Arabidopsis Description
AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.