CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0607150-00	Rice	vacuole	45.01	48.22
TraesCS2D01G428600.1	Wheat	golgi, vacuole	49.62	46.3
TraesCS2A01G430700.2	Wheat	golgi, vacuole	50.38	46.24
TraesCS2B01G451900.1	Wheat	golgi, vacuole	48.85	45.37
HORVU2Hr1G100500.17	Barley	endoplasmic reticulum, golgi, mitochondrion, nucleus	49.1	41.65
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	29.67	26.19
GSMUA_Achr10P...	Banana	endoplasmic reticulum	29.67	26.07
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.64	26.05
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	28.64	25.45
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.88	25.35
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.11	25.18
Solyc08g006030.2.1	Tomato	unclear	28.39	25.06
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	28.39	25.0
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.64	24.89
CDX68735	Canola	endoplasmic reticulum	28.13	24.89
Bra011260.1-P	Field mustard	endoplasmic reticulum	27.88	24.89
AT4G31340.1	Thale cress	endoplasmic reticulum	27.62	24.71
KRH52641	Soybean	endoplasmic reticulum	28.13	24.66
CDY28257	Canola	endoplasmic reticulum	27.62	24.66
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	27.88	24.28
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.6	23.91
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	27.37	23.52
KRH61982	Soybean	endoplasmic reticulum	26.09	23.34
OQU89720	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	27.37	23.31
PGSC0003DMT400038486	Potato	endoplasmic reticulum	27.62	23.28
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.14	23.08
PGSC0003DMT400076024	Potato	cytosol, nucleus	15.6	22.93
Solyc08g074290.2.1	Tomato	nucleus	26.09	22.92
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	26.6	22.76
Bra011163.1-P	Field mustard	plasma membrane	20.97	22.34
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	24.3	21.79
CDX68621	Canola	plasma membrane	21.48	21.71
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	24.3	21.44
CDY43554	Canola	plasma membrane	21.23	21.39
CDY12172	Canola	cytosol	5.37	21.0
CDY67576	Canola	extracellular	5.12	19.8
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	18.41	18.56
Bra024012.1-P	Field mustard	mitochondrion	25.32	15.76
CDY13424	Canola	plasma membrane	25.58	15.5
Bra001871.1-P	Field mustard	cytosol	9.21	13.09
CDX92946	Canola	cytosol	9.21	13.04
CDY24314	Canola	mitochondrion	5.37	10.94
Solyc05g010750.2.1	Tomato	cytosol	3.32	10.32

Protein Annotations

EnsemblPlants:KXG27068	EnsemblPlantsGene:SORBI_3006G208000	Gene3D:1.20.1270.60	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AH/BAR_dom_sf	InterPro:IPR027267	ncoils:Coil	PANTHER:PTHR34360	PANTHER:PTHR34360:SF5	ProteinID:KXG27068
ProteinID:KXG27068.1	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081AD40F	UniProt:A0A1B6PMZ9	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:-:55750676..55753283

Molecular Weight (calculated)

43664.1 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.377

Length

391 amino acids

Sequence
(BLAST)

001: MDLLPIVATL LCLCFVRAQC DAGSASPSPE HEQENQMLRS KVASLEDEIS RRKEETSELE SVVRDRTAQM ATLVGDLELL QKLNLGDDES VMKANTHDGM
101: LEKQIERLGN DLEDQIRKGE SLEARAIEAE RSLEEFGRKL EHAEKTNIDQ KKKIQDLSDR LQYAEDKLST LENEAKSKAE ELAKVHGMWL PHWLSVRVLR
201: YQKLVPVAKD HLDALRNTTA ALASAVANCT STAYRVCRDV IQACAVTAGG FADNYWQRFS QPYLSRIVAA SEPHLSRASV VLEPYMRPAT SAWRSLVSFT
301: SEYHHQVQNG VKRLLEGNEL LTPLSVSADK LAWITAPALL ALPVLSIYKI VSAIVRYPIG KIRRGRTDYK DRQAGADLVA ASRNAESRGR A

Best Arabidopsis Sequence Match ( AT2G24420.2 )
(BLAST)

001: MAAAKLVALL LLLALVFNFT TCIFADAGID GGDEPKLRSD GGDIELDQLN AKIRALESQI DDKTKELKGR EELVTEKEKL LQERQDKVAS LETEVSSLRK
101: KGSSDSVELL SKAQARATEL EKQVEVLKKF LEQKNKEKEL IEAQTSETEK KLNELNSRVE KLHKTNEEQK NKIRKLERAL KISEEEMLRT KHEATTKAKE
201: LMEVHGAWLP PWFAVHWSSF QTVAGTHWDA HGKPVMEKVT QKVTLAKNQA EKWAKPHMAN VKTKYIPAIK ETVKTHVEPH VQTLSTKAKE AYHASKSAVT
301: PHIVKFQEHV DPYYQEAKKF SKPYVDQVAT ATKPHVDKVR ATMKPYTTKT VHYYKEFLES ASTYHHQLQA NVESKLKSHE LLEPFATKEF IWFAASALLA
401: LPIFIVYKFL CSLFCTKTKK PIRQSHQHTR RKARRGHSDK

Arabidopsis Description

AT2G24420 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ26]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.