Factsheet for TraesCS7A01G253000.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G149500.2	Wheat	endoplasmic reticulum	96.68	96.68
HORVU7Hr1G052350.1	Barley	cytosol, plasma membrane	85.62	93.93
Zm00001d029841_P001	Maize	cytosol	37.61	75.56
Os08t0519400-01	Rice	plasma membrane	73.67	73.67
Zm00001d049764_P001	Maize	plasma membrane	70.35	69.74
KXG25592	Sorghum	endoplasmic reticulum, golgi, plasma membrane	69.91	69.45
Zm00001d031532_P001	Maize	plasma membrane	66.59	66.45
Zm00001d005407_P001	Maize	extracellular	41.59	65.96
HORVU2Hr1G002290.5	Barley	endoplasmic reticulum, extracellular	17.04	64.71
TraesCS5A01G275800.2	Wheat	endoplasmic reticulum	58.63	57.99
PGSC0003DMT400076024	Potato	cytosol, nucleus	31.42	53.38
GSMUA_Achr6P01760_001	Banana	endoplasmic reticulum	52.21	53.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum	51.77	52.58
GSMUA_Achr9P13940_001	Banana	endoplasmic reticulum	51.33	52.37
VIT_04s0008g02720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	51.55	51.89
KRH52641	Soybean	endoplasmic reticulum	50.44	51.12
KRH61982	Soybean	endoplasmic reticulum	48.89	50.57
Solyc08g074290.2.1	Tomato	nucleus	46.68	47.42
Solyc08g006030.2.1	Tomato	unclear	46.24	47.18
PGSC0003DMT400038486	Potato	endoplasmic reticulum	47.35	46.12
CDY20313	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.14	45.35
AT4G31340.1	Thale cress	endoplasmic reticulum	43.81	45.31
CDY28257	Canola	endoplasmic reticulum	43.58	44.98
CDY46149	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.48	44.65
AT2G24420.1	Thale cress	endoplasmic reticulum, vacuole	43.36	44.55
Bra011260.1-P	Field mustard	endoplasmic reticulum	43.14	44.52
CDX68735	Canola	endoplasmic reticulum	43.36	44.34
CDX72304	Canola	endoplasmic reticulum, plasma membrane, vacuole	42.48	44.14
Bra032096.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.48	42.67
CDY34774	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.16	42.04
Solyc05g010750.2.1	Tomato	cytosol	11.5	41.27
Solyc07g008970.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	39.38	40.83
PGSC0003DMT400073989	Potato	extracellular, plasma membrane, vacuole	39.6	40.41
Bra007856.1-P	Field mustard	endoplasmic reticulum, vacuole	37.83	37.42
Solyc05g010760.1.1	Tomato	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.41	36.54
CDY12172	Canola	cytosol	7.52	34.0
Bra011163.1-P	Field mustard	plasma membrane	26.55	32.7
CDY43554	Canola	plasma membrane	27.88	32.47
CDX68621	Canola	plasma membrane	27.43	32.04
AT4G30090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	26.55	30.93
TraesCS2A01G430700.2	Wheat	golgi, vacuole	28.76	30.52
Bra024012.1-P	Field mustard	mitochondrion	42.04	30.25
CDY13424	Canola	plasma membrane	42.04	29.46
CDY67576	Canola	extracellular	5.53	24.75
Bra001871.1-P	Field mustard	cytosol	11.06	18.18
CDX92946	Canola	cytosol	11.06	18.12
CDY24314	Canola	mitochondrion	4.42	10.42

Protein Annotations

EnsemblPlants:TraesCS7A01G253000.2	EnsemblPlantsGene:TraesCS7A01G253000	Gene3D:1.20.120.20	Gene3D:1.20.5.340	ncoils:Coil	PANTHER:PTHR34360
PANTHER:PTHR34360:SF4	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF58100	SUPFAM:SSF58113	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:238823721..238829218

Molecular Weight (calculated)

50312.5 Da

IEP (calculated)

9.920

GRAVY (calculated)

-0.460

Length

452 amino acids

Sequence
(BLAST)

001: MGISGRFLLL AVALVIAAAA VAADEQAAVD LAGPGEIAAG VKEAAEAAAL RAELAQLREK ISVLESDIAQ RSQDLKSKDD GIAKLEKDIG EKSQKIATLQ
101: SEITSLQKKG SVAAEEQAGK AIARVVELEE QIEKLNKEIE AQSSQRTTLE ARANKAEKKV QDLNSKLESL QKASGEQKRM IQKTERALKV AEEELMRLQL
201: EATTKAKQLT EVHGAWLPPW LVTHSAQYLE VVSGHWNEHG KPAMDIFLQK ASEKSAHAKK WAEPHIETAK LKLVPVKEKL AVLKKNAEPY VEKASAKSVE
301: VYEASRDAIT PHFVKFKEVS DPYFQEAKKI SKPYIDQVAE VTKPHVEKVR STLKPYTKRA VHVYGTFLES ATTYHRQAQA TISDYLHQHE ITKSLVTKEL
401: VWFLASALLA LPVFIMYRLL VDTFCTKKQK RSPLNGNGNN GNRRHKRRHA EK

Best Arabidopsis Sequence Match ( AT4G31340.1 )
(BLAST)

001: MAAAKLVALL LLALLFTTSV FADADEPEVS EAAGSDGSSK IHLDQLNAKI RALESQIDEK TREVQGKDEV VAEKEKLLKE REDKIASLQT EVSSLQKKGS
101: SDSAKQLGKA QARADELEKQ VEVLKNFLEQ KNKEKDSTEA RTNEAEKKLR ELNSSLDKLQ KTNEEQKNKI GKLERAIKIA EEEMLRTKLE ATTKAKELLE
201: AHGSWLPPWL AVHWFKFQTY TETHWEAHGK PAVETVILKV TEAKAQAEKW AEPHVENVKT KYIPAIKETV TIHVEPHFRT LSIKAKEAYH SSKSAVSPHI
301: VTVQEFVDPY YQEAKKFSKP YVDQVATTTK PHVDKMKVAM KPYTTKVIIV YTEFLESATT YHNQVQAHVE RKLKSHELTE PFATNEFVWF AASALLVFPI
401: FVAYRVLSSL FCTKTKKPVK HPHHHGRRKA KRAHTDK

Arabidopsis Description

AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.