Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31520 | Soybean | cytosol | 80.0 | 60.53 |
| KRG97393 | Soybean | nucleus | 94.78 | 57.98 |
| Zm00001d016570_P001 | Maize | cytosol | 29.57 | 15.81 |
| Solyc05g015640.2.1 | Tomato | cytosol | 26.96 | 15.35 |
| VIT_01s0010g03800.t01 | Wine grape | cytosol | 26.09 | 15.31 |
| Bra030034.1-P | Field mustard | cytosol | 26.09 | 15.15 |
| CDY15722 | Canola | cytosol | 26.09 | 15.15 |
| AT1G27300.1 | Thale cress | nucleus | 26.09 | 15.0 |
| PGSC0003DMT400084737 | Potato | cytosol | 26.96 | 14.98 |
| CDY03907 | Canola | cytosol | 25.22 | 14.95 |
| CDY27605 | Canola | cytosol | 26.09 | 14.93 |
| Bra032817.1-P | Field mustard | nucleus | 26.09 | 14.93 |
| CDX84933 | Canola | cytosol | 25.22 | 14.72 |
| Os02t0509600-01 | Rice | plasma membrane | 26.96 | 14.69 |
| TraesCS2A01G346700.1 | Wheat | cytosol | 24.35 | 14.43 |
| HORVU2Hr1G084420.1 | Barley | cytosol | 23.48 | 14.06 |
| TraesCS2B01G365000.1 | Wheat | cytosol | 23.48 | 14.06 |
| EES05123 | Sorghum | nucleus | 26.09 | 13.95 |
| TraesCS2D01G345400.1 | Wheat | cytosol | 23.48 | 13.78 |
| Zm00001d050563_P001 | Maize | nucleus | 22.61 | 12.87 |
Protein Annotations
| EMBL:ACUP02000563 | EnsemblPlants:KRH76090 | EnsemblPlantsGene:GLYMA_01G130700 | PANTHER:PTHR35280 | ProteinID:KRH76090 | ProteinID:KRH76090.1 |
| UniParc:UPI00023BEA11 | UniProt:K7K3K5 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:44639344..44639894
Molecular Weight (calculated)
13147.3 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.857
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQDRRFELI DHAIQKLVHD NTNKVQESLH NNDAQYQHAL SHLLSVSQLK MLKGEEILEQ FEASSSSEPV ASITQETESE NEDAGESKGS ENDEIIKELK
101: KVKRQNFVTH CLKTL
101: KVKRQNFVTH CLKTL
001: MESSEDVENL SRAIEKLLHE KRKREASGDA FIEDADDQLF LSSLISQLES PNPKGKEDVI TGEEEEKEEE SADSSPSKGK SEGQRQLEES IEEIAKDIKK
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
Arabidopsis Description
F17L21.9 [Source:UniProtKB/TrEMBL;Acc:Q9FZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.