Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 79.19 | 89.29 |
| KRH58337 | Soybean | plasma membrane | 89.14 | 86.03 |
| KRH42212 | Soybean | plasma membrane | 88.24 | 84.78 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 74.66 | 71.74 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 73.3 | 69.53 |
| KRH35158 | Soybean | plasma membrane | 61.99 | 69.19 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 66.06 | 66.67 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 66.97 | 66.07 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 66.52 | 65.92 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 63.35 | 65.12 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 63.8 | 64.98 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 60.18 | 64.88 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 63.8 | 64.68 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 62.9 | 64.65 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 61.54 | 63.85 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 60.63 | 63.81 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 58.82 | 63.73 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 46.15 | 63.35 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 59.28 | 62.09 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 65.16 | 61.8 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 60.63 | 61.19 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 59.73 | 60.83 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 60.18 | 60.73 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.18 | 60.73 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 59.73 | 60.27 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 42.53 | 59.12 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 63.8 | 59.0 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 50.23 | 57.81 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 57.47 | 56.95 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 58.82 | 56.77 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 46.15 | 56.67 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 52.94 | 56.52 |
| KRH42214 | Soybean | extracellular | 42.08 | 56.36 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 52.04 | 55.83 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 53.85 | 55.61 |
| KRH58340 | Soybean | plasma membrane | 58.82 | 55.08 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 51.58 | 54.81 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 53.33 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 53.33 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 53.33 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 53.33 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 51.13 | 53.3 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 43.89 | 53.3 |
| KRH10486 | Soybean | plasma membrane | 44.34 | 52.97 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 29.86 | 52.8 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 49.77 | 52.38 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 49.77 | 52.38 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 49.77 | 51.89 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 52.94 | 51.09 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 48.42 | 50.47 |
| GSMUA_Achr10P... | Banana | plasma membrane | 57.92 | 48.85 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 42.53 | 47.24 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 48.87 | 47.16 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 42.08 | 44.93 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 41.18 | 44.17 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 43.44 | 43.44 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 39.37 | 42.65 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 42.99 | 42.41 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 39.82 | 41.9 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 43.89 | 40.93 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 43.89 | 36.06 |
Protein Annotations
| EntrezGene:100802489 | MapMan:24.2.12.3 | EMBL:ACUP02004791 | InterPro:Ccc1_fam | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G076100 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | UniProt:K7L5G1 |
| EnsemblPlants:KRH42213 | ProteinID:KRH42213 | ProteinID:KRH42213.1 | PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 |
| TMHMM:TMhelix | UniParc:UPI0002339121 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:5805675..5806340
Molecular Weight (calculated)
23106.4 Da
IEP (calculated)
9.571
GRAVY (calculated)
0.365
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLGARTNG ISSNQVEIPM HVNGVEPKQG EESNIDYSQR AQWLRAAVLG ANDGLVSVAS LMMGVGAVKK DISAMILAGF AGLVAGACSM AIGEFVSVYT
101: QYDIEKAQLK RESESNNNRG VNEEAQREKL PKPFQAALAS ALAFSVGALV PMLAAVFIRS HKVRMGVVAA AVSLALLVFG GVGAVLGNTP VKRSCLRVLI
201: GGWMAMAITF GLTKLIGSAE L
101: QYDIEKAQLK RESESNNNRG VNEEAQREKL PKPFQAALAS ALAFSVGALV PMLAAVFIRS HKVRMGVVAA AVSLALLVFG GVGAVLGNTP VKRSCLRVLI
201: GGWMAMAITF GLTKLIGSAE L
001: MTSNVQLSET NSPRNQKTRP RAEKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
Arabidopsis Description
Vacuolar iron transporter homolog 2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF6]
SUBAcon: [cytosol,peroxisome,plastid]
SUBAcon: [cytosol,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.