Factsheet for HORVU4Hr1G020210.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G081800.3
HORVU5Hr1G071910.1
HORVU7Hr1G000910.1
HORVU7Hr1G048940.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25190.1	HORVU7Hr1G000910.1	AT1G01010.1	21798944
AT3G25190.1	HORVU2Hr1G081800.3	AT4G26455.1	21798944
AT3G25190.1	HORVU5Hr1G071910.1	AT4G26455.1	21798944
AT3G25190.1	HORVU7Hr1G048940.3	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G110600.1	Wheat	cytosol, plasma membrane, vacuole	95.09	96.38
TraesCS4A01G209600.1	Wheat	plasma membrane	85.27	95.98
TraesCS4B01G112900.1	Wheat	endoplasmic reticulum	96.88	80.67
Os11t0161900-00	Rice	cytosol, nucleus, plasma membrane	57.59	62.32
OQU82931	Sorghum	cytosol, peroxisome, plastid, vacuole	65.62	62.03
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	48.21	52.94
Bra008277.1-P	Field mustard	cytosol, peroxisome, vacuole	44.2	51.03
CDY45946	Canola	cytosol, peroxisome, vacuole	44.2	51.03
CDY20388	Canola	cytosol, peroxisome, vacuole	43.75	50.52
KRH35158	Soybean	plasma membrane	44.64	50.51
CDY33672	Canola	cytosol, peroxisome, vacuole	43.75	50.26
CDX87566	Canola	cytosol, peroxisome, vacuole	43.3	50.0
AT1G76800.1	Thale cress	cytosol, peroxisome, plasma membrane	43.3	49.49
CDX88318	Canola	cytosol, peroxisome, vacuole	42.86	49.48
Bra015718.1-P	Field mustard	cytosol, peroxisome, vacuole	42.86	49.48
CDX96601	Canola	cytosol, peroxisome, vacuole	43.75	49.0
Bra012271.1-P	Field mustard	cytosol, peroxisome, vacuole	43.75	49.0
CDY71883	Canola	cytosol, peroxisome, vacuole	43.75	49.0
AT1G21140.1	Thale cress	cytosol, peroxisome, plasma membrane	43.75	49.0
AT3G43630.1	Thale cress	cytosol, peroxisome, plasma membrane	43.3	48.5
Bra016431.1-P	Field mustard	cytosol	23.66	48.18
AT3G43660.1	Thale cress	cytosol, peroxisome, vacuole	42.41	47.98
CDY04601	Canola	cytosol, peroxisome, vacuole	42.86	47.76
Bra025879.1-P	Field mustard	cytosol, peroxisome, vacuole	42.86	47.76
CDY29473	Canola	cytosol, peroxisome, vacuole	42.86	47.76
CDY01332	Canola	cytosol, peroxisome, vacuole	43.75	46.67
Solyc04g051180.1.1	Tomato	extracellular	34.38	46.67
VIT_18s0076g00320.t01	Wine grape	cytosol, peroxisome, vacuole	45.98	46.61
VIT_12s0055g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	46.43	46.43
KRG91640	Soybean	cytosol, peroxisome, vacuole	45.09	46.12
KRH43941	Soybean	cytosol, peroxisome, vacuole	44.64	46.08
Solyc01g104820.2.1	Tomato	plasma membrane	43.75	45.16
KRH08706	Soybean	cytosol, peroxisome, vacuole	46.88	45.06
HORVU2Hr1G101180.2	Barley	cytosol	45.54	44.54
PGSC0003DMT400076561	Potato	cytosol, peroxisome, plasma membrane	43.3	44.5
PGSC0003DMT400008929	Potato	cytosol, peroxisome, vacuole	45.09	44.49
Solyc01g104800.2.1	Tomato	cytosol, peroxisome, plasma membrane	40.62	44.39
KRH42214	Soybean	extracellular	32.59	44.24
VIT_12s0055g00860.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.75	43.95
Solyc01g104780.2.1	Tomato	nucleus, peroxisome, vacuole	41.52	43.87
PGSC0003DMT400076567	Potato	plasma membrane	41.07	43.81
Solyc01g104810.2.1	Tomato	plasma membrane	41.96	43.72
KRH70313	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.43	43.51
PGSC0003DMT400076498	Potato	plasma membrane	41.96	43.32
PGSC0003DMT400076565	Potato	plasma membrane	41.52	43.26
KRH42215	Soybean	cytosol, plastid, vacuole	44.2	43.23
PGSC0003DMT400032701	Potato	plasma membrane	41.07	43.19
KRH58339	Soybean	cytosol, peroxisome, plasma membrane	42.86	43.05
KRH42213	Soybean	cytosol, endoplasmic reticulum, plasma membrane	42.41	42.99
KRH58338	Soybean	cytosol, peroxisome, plasma membrane	37.05	42.35
KRH28884	Soybean	cytosol, peroxisome, vacuole	43.3	42.17
CDY15107	Canola	cytosol, peroxisome, plasma membrane	41.07	42.01
KRH58337	Soybean	plasma membrane	42.86	41.92
KRH10486	Soybean	plasma membrane	34.38	41.62
CDY52279	Canola	cytosol, peroxisome, plasma membrane	40.62	41.55
Bra013226.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.62	41.55
PGSC0003DMT400076566	Potato	extracellular, plasma membrane, vacuole	29.46	40.99
KRH42212	Soybean	plasma membrane	41.96	40.87
AT3G25190.1	Thale cress	cytosol, peroxisome, plastid	39.73	40.64
VIT_12s0055g00850.t01	Wine grape	cytosol, peroxisome, plasma membrane	37.95	40.28
KRH76566	Soybean	cytosol, peroxisome, vacuole	41.52	39.91
KRH58340	Soybean	plasma membrane	41.96	39.83
GSMUA_Achr10P...	Banana	plasma membrane	46.43	39.69
HORVU6Hr1G061000.1	Barley	extracellular	45.09	38.55
Solyc01g105260.1.1	Tomato	extracellular, vacuole	27.23	38.36
KRH58336	Soybean	peroxisome, plasma membrane, vacuole	29.91	37.22
PGSC0003DMT400076558	Potato	cytosol, peroxisome, plasma membrane	29.91	32.52
KRH42211	Soybean	cytosol, plasma membrane, vacuole	29.91	31.9
Solyc01g104830.2.1	Tomato	cytosol, peroxisome, plasma membrane	28.12	30.88

Protein Annotations

EnsemblPlants:HORVU4Hr1G020210.1	EnsemblPlantsGene:HORVU4Hr1G020210	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Ccc1_fam
PANTHER:PTHR31851	PANTHER:PTHR31851:SF5	PFAM:PF01988	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B472481
UniProt:A0A287NGY8	MapMan:24.2.12.3	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:99470988..99471662

Molecular Weight (calculated)

22502.5 Da

IEP (calculated)

8.962

GRAVY (calculated)

0.511

Length

224 amino acids

Sequence
(BLAST)

001: HKMATQNNDT KLAVAELGPT PAPEAMKLCT VCVATATHDA MSLPSQQGQW LRAAVLGASD GLVSTSALML GIGAARPADP RAALLSGVAG LVAGACSMAI
101: GEYVSVHAQL DVELAGLKRL EEARGYPADR AGLPNPCHAS AASAMSFAAG AAIPLLAAWF VTSYAVRVAL VVATATLTLA VFGALGAVQG RAPGGRAGLR
201: AALGGLVAMG VTYGLMKLFR THSV

Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)

001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL

Arabidopsis Description

Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.