Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 98.5 | 93.81 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 90.5 | 90.05 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 90.5 | 90.05 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 89.5 | 89.5 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 83.5 | 85.64 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 85.0 | 85.0 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 78.0 | 80.41 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 78.0 | 80.41 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 77.5 | 79.9 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 77.5 | 79.9 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 70.0 | 64.52 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 65.0 | 63.73 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 67.0 | 63.21 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 68.0 | 62.67 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 59.5 | 61.98 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 61.5 | 59.71 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 61.0 | 58.94 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 36.0 | 57.6 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 61.5 | 57.48 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 59.5 | 57.21 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 62.0 | 56.62 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 59.0 | 56.19 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 59.0 | 56.19 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 59.0 | 56.19 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 58.5 | 55.71 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 61.0 | 55.71 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 59.0 | 55.66 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 50.5 | 55.49 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 58.0 | 55.24 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 58.0 | 55.24 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 58.0 | 54.72 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 61.0 | 53.28 |
| KRH10486 | Soybean | plasma membrane | 48.5 | 52.43 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.5 | 52.36 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 57.5 | 50.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 65.5 | 50.0 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 49.5 | 49.75 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 49.5 | 44.8 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 46.0 | 44.44 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 49.0 | 43.75 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 50.5 | 42.62 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 50.0 | 37.17 |
Protein Annotations
| EnsemblPlants:CDY71883 | EnsemblPlantsGene:GSBRNA2T00021000001 | GO:A0A078JW72 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | PFAM:PF01988 | ProteinID:CDY71883 | ProteinID:CDY71883.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE82D6 | UniProt:A0A078JW72 | MapMan:24.2.12.3 | : |
Description
BnaCnng74920DBnaCnng74920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JW72]
Coordinates
chrLK047937:-:889..1491
Molecular Weight (calculated)
20929.9 Da
IEP (calculated)
9.057
GRAVY (calculated)
0.493
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHNVNNSL NVDMEKDQEK AFDFSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKGDIK TMMLSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGEIEKEKLP SPMQAAAASA LAFSLGAIVP LLAAAFVKEY KVRVGVILAA VTLALVMFGW LGAVLGKAPV VKSSARVLIG GWLAMAVTFG LTKLVGSHGM
101: GGEIEKEKLP SPMQAAAASA LAFSLGAIVP LLAAAFVKEY KVRVGVILAA VTLALVMFGW LGAVLGKAPV VKSSARVLIG GWLAMAVTFG LTKLVGSHGM
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.