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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • golgi 4
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS4A01G499900.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G000300.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G000200.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G25190.1 TraesCS4A01G499900.1 AT1G01010.1 21798944
AT3G25190.1 TraesCS7A01G000300.1 AT1G01010.1 21798944
AT3G25190.1 TraesCS7D01G000200.1 AT1G01010.1 21798944
AT3G25190.1 TraesCS2A01G331000.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS2B01G351300.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS2D01G332000.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS5A01G257000.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS5B01G256500.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS5D01G265600.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS7A01G240200.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS7B01G135800.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS7D01G238200.1 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G209600.1 Wheat plasma membrane 72.86 98.49
TraesCS4D01G110600.1 Wheat cytosol, plasma membrane, vacuole 80.67 98.19
HORVU4Hr1G020210.1 Barley cytosol, peroxisome 80.67 96.88
Os11t0161900-00 Rice cytosol, nucleus, plasma membrane 48.7 63.28
OQU82931 Sorghum cytosol, peroxisome, plastid, vacuole 55.02 62.45
GSMUA_Achr9P29610_001 Banana cytosol, peroxisome, vacuole 41.26 54.41
TraesCS2B01G455000.1 Wheat cytosol, plasma membrane, vacuole 36.43 53.85
TraesCS2B01G610400.1 Wheat cytosol, plasma membrane, vacuole 40.89 53.4
TraesCS2B01G455100.1 Wheat cytosol, plasma membrane, vacuole 41.64 53.33
TraesCS2B01G455200.1 Wheat cytosol, plasma membrane, vacuole 41.64 53.33
Bra008277.1-P Field mustard cytosol, peroxisome, vacuole 37.17 51.55
CDY45946 Canola cytosol, peroxisome, vacuole 37.17 51.55
KRH35158 Soybean plasma membrane 37.92 51.52
CDY20388 Canola cytosol, peroxisome, vacuole 36.8 51.03
TraesCS2B01G455300.1 Wheat cytosol, plasma membrane, vacuole 40.15 50.94
CDY33672 Canola cytosol, peroxisome, vacuole 36.8 50.77
CDX87566 Canola cytosol, peroxisome, vacuole 36.43 50.52
AT1G76800.1 Thale cress cytosol, peroxisome, plasma membrane 36.43 50.0
Bra015718.1-P Field mustard cytosol, peroxisome, vacuole 36.06 50.0
CDY71883 Canola cytosol, peroxisome, vacuole 37.17 50.0
CDX88318 Canola cytosol, peroxisome, vacuole 36.06 50.0
Bra012271.1-P Field mustard cytosol, peroxisome, vacuole 37.17 50.0
CDX96601 Canola cytosol, peroxisome, vacuole 36.8 49.5
AT1G21140.1 Thale cress cytosol, peroxisome, plasma membrane 36.8 49.5
AT3G43630.1 Thale cress cytosol, peroxisome, plasma membrane 36.43 49.0
AT3G43660.1 Thale cress cytosol, peroxisome, vacuole 36.06 48.99
CDY29473 Canola cytosol, peroxisome, vacuole 36.43 48.76
CDY04601 Canola cytosol, peroxisome, vacuole 36.43 48.76
Bra025879.1-P Field mustard cytosol, peroxisome, vacuole 36.43 48.76
Solyc04g051180.1.1 Tomato extracellular 29.37 47.88
TraesCS2B01G454900.1 Wheat cytosol, plasma membrane, vacuole 37.55 47.64
CDY01332 Canola cytosol, peroxisome, vacuole 37.17 47.62
VIT_18s0076g00320.t01 Wine grape cytosol, peroxisome, vacuole 39.03 47.51
VIT_12s0055g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 39.41 47.32
Bra016431.1-P Field mustard cytosol 19.33 47.27
KRG91640 Soybean cytosol, peroxisome, vacuole 38.29 47.03
KRH43941 Soybean cytosol, peroxisome, vacuole 37.92 47.0
KRH08706 Soybean cytosol, peroxisome, vacuole 39.78 45.92
KRH42214 Soybean extracellular 27.88 45.45
VIT_12s0055g00860.t01 Wine grape cytosol, peroxisome, plasma membrane 37.55 45.29
Solyc01g104820.2.1 Tomato plasma membrane 36.43 45.16
PGSC0003DMT400008929 Potato cytosol, peroxisome, vacuole 37.92 44.93
Solyc01g104780.2.1 Tomato nucleus, peroxisome, vacuole 35.32 44.81
PGSC0003DMT400076561 Potato cytosol, peroxisome, plasma membrane 36.06 44.5
Solyc01g104800.2.1 Tomato cytosol, peroxisome, plasma membrane 33.83 44.39
KRH70313 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.41 44.35
PGSC0003DMT400076498 Potato plasma membrane 35.69 44.24
TraesCS6B01G285700.1 Wheat cytosol, peroxisome, vacuole 37.92 44.16
KRH42215 Soybean cytosol, plastid, vacuole 37.55 44.1
KRH58339 Soybean cytosol, peroxisome, plasma membrane 36.43 43.95
GSMUA_Achr10P... Banana plasma membrane 42.75 43.89
KRH42213 Soybean cytosol, endoplasmic reticulum, plasma membrane 36.06 43.89
PGSC0003DMT400076567 Potato plasma membrane 34.2 43.81
Solyc01g104810.2.1 Tomato plasma membrane 34.94 43.72
CDY15107 Canola cytosol, peroxisome, plasma membrane 35.32 43.38
PGSC0003DMT400076565 Potato plasma membrane 34.57 43.26
PGSC0003DMT400032701 Potato plasma membrane 34.2 43.19
Bra013226.1-P Field mustard cytosol, peroxisome, plasma membrane 34.94 42.92
CDY52279 Canola cytosol, peroxisome, plasma membrane 34.94 42.92
KRH58338 Soybean cytosol, peroxisome, plasma membrane 31.23 42.86
KRH58337 Soybean plasma membrane 36.43 42.79
PGSC0003DMT400076566 Potato extracellular, plasma membrane, vacuole 25.28 42.24
KRH28884 Soybean cytosol, peroxisome, vacuole 36.06 42.17
KRH42212 Soybean plasma membrane 35.69 41.74
KRH10486 Soybean plasma membrane 28.62 41.62
AT3G25190.1 Thale cress cytosol, peroxisome, plastid 33.83 41.55
KRH58340 Soybean plasma membrane 36.43 41.53
VIT_12s0055g00850.t01 Wine grape cytosol, peroxisome, plasma membrane 32.34 41.23
TraesCS2B01G404700.1 Wheat cytosol, peroxisome, vacuole 35.69 40.68
KRH76566 Soybean cytosol, peroxisome, vacuole 34.57 39.91
Solyc01g105260.1.1 Tomato extracellular, vacuole 23.05 38.99
KRH58336 Soybean peroxisome, plasma membrane, vacuole 25.28 37.78
KRH42211 Soybean cytosol, plasma membrane, vacuole 25.28 32.38
PGSC0003DMT400076558 Potato cytosol, peroxisome, plasma membrane 23.79 31.07
Solyc01g104830.2.1 Tomato cytosol, peroxisome, plasma membrane 22.3 29.41
Protein Annotations
EnsemblPlants:TraesCS4B01G112900.1EnsemblPlantsGene:TraesCS4B01G112900InterPro:Ccc1_famPANTHER:PTHR31851PANTHER:PTHR31851:SF5PFAM:PF01988
SEG:segSignalP:SignalP-noTMTMHMM:TMhelixMapMan:24.2.12.3::
Description
No Description!
Coordinates
chr4B:-:127687274..127688083
Molecular Weight (calculated)
27582.9 Da
IEP (calculated)
8.269
GRAVY (calculated)
0.565
Length
269 amino acids
Sequence
(BLAST)
001: MVHHYRCYLH IIVSLLYCLV DIYTGSCVRH TLVCFCACGT RTPLLPHKMA TDNDTKLAVA ELGPTPAPEA MKLCTVCVAT ATHDAMSLPS QQGQWLRAAV
101: LGASDGLVST SALMLGIGAA RPADPRAALL SGVAGLVAGA CSMAIGEYVS VHAQLDVELA GLKRLEEARG YPADRAGLPN PCHASAASAL SFAAGAAIPL
201: LAAWFVTSYG VRVAVVVATA TLALAVFGAL GAVQGRAPGG RAGLRAALGG LVAMGVTYGL MKLFRTHSD
Best Arabidopsis Sequence Match ( AT1G21140.1 )
(BLAST)
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.