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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_19s0015g01790.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G25190.1 VIT_19s0015g01790.t01 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_12s0055g00860.t01 Wine grape cytosol, peroxisome, plasma membrane 67.3 63.68
VIT_12s0055g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 65.88 62.05
KRH58338 Soybean cytosol, peroxisome, plasma membrane 55.45 59.69
KRH42213 Soybean cytosol, endoplasmic reticulum, plasma membrane 62.09 59.28
PGSC0003DMT400076565 Potato plasma membrane 59.24 58.14
Solyc01g104810.2.1 Tomato plasma membrane 59.24 58.14
Solyc01g104800.2.1 Tomato cytosol, peroxisome, plasma membrane 55.92 57.56
PGSC0003DMT400076567 Potato plasma membrane 56.87 57.14
KRH42212 Soybean plasma membrane 62.09 56.96
KRH58337 Soybean plasma membrane 61.61 56.77
PGSC0003DMT400076566 Potato extracellular, plasma membrane, vacuole 43.13 56.52
PGSC0003DMT400032701 Potato plasma membrane 56.87 56.34
Solyc01g104820.2.1 Tomato plasma membrane 54.98 53.46
GSMUA_Achr9P29610_001 Banana cytosol, peroxisome, vacuole 51.66 53.43
VIT_18s0076g00320.t01 Wine grape cytosol, peroxisome, vacuole 55.92 53.39
PGSC0003DMT400076561 Potato cytosol, peroxisome, plasma membrane 54.98 53.21
Solyc01g105260.1.1 Tomato extracellular, vacuole 39.81 52.83
KRH28884 Soybean cytosol, peroxisome, vacuole 55.92 51.3
KRH76566 Soybean cytosol, peroxisome, vacuole 55.92 50.64
CDY15107 Canola cytosol, peroxisome, plasma membrane 52.13 50.23
KRH42214 Soybean extracellular 38.86 49.7
TraesCS2D01G588000.1 Wheat cytosol, plasma membrane, vacuole 45.02 49.48
Bra013226.1-P Field mustard cytosol, peroxisome, plasma membrane 51.18 49.32
AT3G25190.1 Thale cress cytosol, peroxisome, plastid 51.18 49.32
CDY52279 Canola cytosol, peroxisome, plasma membrane 51.18 49.32
Os04t0686800-01 Rice cytosol, peroxisome, vacuole 48.34 49.04
Zm00001d026679_P001 Maize cytosol, peroxisome, vacuole 46.92 47.83
KRH42215 Soybean cytosol, plastid, vacuole 51.66 47.6
TraesCS2B01G610400.1 Wheat cytosol, plasma membrane, vacuole 46.45 47.57
Zm00001d002884_P001 Maize cytosol, plasma membrane, vacuole 47.87 47.2
KRH58336 Soybean peroxisome, plasma membrane, vacuole 39.81 46.67
KRH58339 Soybean cytosol, peroxisome, plasma membrane 49.29 46.64
KRH58340 Soybean plasma membrane 52.13 46.61
TraesCS2A01G434100.1 Wheat cytosol, plasma membrane, vacuole 27.01 45.6
TraesCS2B01G455300.1 Wheat cytosol, plasma membrane, vacuole 45.5 45.28
TraesCS2A01G434000.1 Wheat cytosol, plasma membrane, vacuole 45.02 45.24
TraesCS2B01G455200.1 Wheat cytosol, plasma membrane, vacuole 44.55 44.76
TraesCS2D01G431900.1 Wheat cytosol, plasma membrane, vacuole 44.55 44.76
TraesCS2B01G455100.1 Wheat cytosol, plasma membrane, vacuole 44.55 44.76
TraesCS2A01G434200.1 Wheat cytosol, plasma membrane, vacuole 44.55 44.76
TraesCS2A01G433900.1 Wheat cytosol, plasma membrane, vacuole 44.55 44.76
EES11692 Sorghum cytosol, peroxisome, vacuole 48.34 44.54
TraesCS2D01G432000.1 Wheat cytosol, plasma membrane, vacuole 43.6 43.4
TraesCS2B01G455000.1 Wheat cytosol, plasma membrane, vacuole 36.49 42.31
TraesCS4A01G209600.1 Wheat plasma membrane 39.81 42.21
GSMUA_Achr10P... Banana plasma membrane 50.71 40.84
HORVU2Hr1G101180.2 Barley cytosol 44.08 40.61
Os11t0161900-00 Rice cytosol, nucleus, plasma membrane 39.81 40.58
TraesCS2B01G454900.1 Wheat cytosol, plasma membrane, vacuole 40.76 40.57
TraesCS4D01G110600.1 Wheat cytosol, plasma membrane, vacuole 41.23 39.37
PGSC0003DMT400076558 Potato cytosol, peroxisome, plasma membrane 37.91 38.84
KRH42211 Soybean cytosol, plasma membrane, vacuole 38.39 38.57
HORVU4Hr1G020210.1 Barley cytosol, peroxisome 40.28 37.95
Solyc01g104830.2.1 Tomato cytosol, peroxisome, plasma membrane 35.07 36.27
OQU82931 Sorghum cytosol, peroxisome, plastid, vacuole 40.28 35.87
TraesCS4B01G112900.1 Wheat endoplasmic reticulum 41.23 32.34
VIT_04s0044g01960.t01 Wine grape cytosol, peroxisome, plasma membrane 43.13 30.33
Protein Annotations
EntrezGene:100262359wikigene:100262359MapMan:24.2.12.3ProteinID:CCB46157ProteinID:CCB46157.1InterPro:Ccc1_fam
UniProt:F6H1T8EMBL:FN595228GO:GO:0003674GO:GO:0005215GO:GO:0005381GO:GO:0005384
GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006880GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0030026GO:GO:0034755GO:GO:0071281
GO:GO:0071421EntrezGene:LOC100262359wikigene:LOC100262359PFAM:PF01988PANTHER:PTHR31851PANTHER:PTHR31851:SF30
TMHMM:TMhelixUniParc:UPI000198464BArrayExpress:VIT_12s0055g00850EnsemblPlantsGene:VIT_12s0055g00850EnsemblPlants:VIT_12s0055g00850.t01RefSeq:XP_002268474
RefSeq:XP_002268474.1SEG:seg::::
Description
No Description!
Coordinates
chr12:-:14203696..14204345
Molecular Weight (calculated)
22034.1 Da
IEP (calculated)
8.940
GRAVY (calculated)
0.477
Length
211 amino acids
Sequence
(BLAST)
001: MAALNPACKN VEISVHEDNL VPHGQPQDPK AQHFHSSNRG QWLRAAILGA NNGLVSVASL MMGVGALKRD VMAMALAGFA GLVAGSCSVA IGEFVSIYTQ
101: LDIEATQMRR NSREDSKNLE LPNPFQVAIT SALTFVVGAM VPVVAAAITR DHKVRLGVVV AVSSLAFLVF GGVGAILGRT PVGWSCARVL VGGWMAMAIT
201: SGLTMLIGSS H
Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.