Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58337 | Soybean | plasma membrane | 91.74 | 92.14 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 84.78 | 88.24 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 72.17 | 84.69 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 73.04 | 73.04 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 72.17 | 71.24 |
| KRH35158 | Soybean | plasma membrane | 58.7 | 68.18 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.78 | 66.52 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 63.04 | 66.21 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.91 | 65.92 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 61.74 | 65.44 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 61.74 | 65.14 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 57.39 | 64.39 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 60.0 | 64.19 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 60.0 | 64.19 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 58.26 | 63.81 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 56.52 | 63.73 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 58.7 | 63.38 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 60.0 | 63.01 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 59.57 | 62.56 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 59.57 | 62.56 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 59.57 | 62.56 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.96 | 62.09 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 43.04 | 61.49 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 61.74 | 60.94 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 57.83 | 59.64 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 56.09 | 59.45 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 58.7 | 58.95 |
| KRH42214 | Soybean | extracellular | 42.17 | 58.79 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 40.43 | 58.49 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 60.43 | 58.16 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 48.26 | 57.81 |
| KRH58340 | Soybean | plasma membrane | 58.7 | 57.2 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 50.43 | 56.31 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 43.91 | 56.11 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 50.0 | 55.56 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 49.13 | 54.33 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 50.43 | 54.21 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 48.26 | 52.86 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 48.26 | 52.86 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 48.26 | 52.86 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 48.7 | 52.83 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 47.83 | 52.38 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 41.3 | 52.2 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 28.26 | 52.0 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 47.39 | 51.9 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 47.39 | 51.9 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.39 | 51.42 |
| KRH10486 | Soybean | plasma membrane | 41.3 | 51.35 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 50.43 | 50.66 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 45.65 | 49.53 |
| GSMUA_Achr10P... | Banana | plasma membrane | 53.91 | 47.33 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 46.52 | 46.72 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 40.0 | 46.23 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 40.0 | 44.66 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 38.7 | 43.63 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 39.13 | 43.48 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 39.57 | 43.33 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 41.3 | 42.99 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 40.87 | 41.96 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 42.17 | 40.93 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 41.74 | 35.69 |
Protein Annotations
| EntrezGene:100790996 | MapMan:24.2.12.3 | EMBL:ACUP02004791 | InterPro:Ccc1_fam | EnsemblPlantsGene:GLYMA_08G076000 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | UniProt:I1KR67 | EnsemblPlants:KRH42212 |
| ProteinID:KRH42212 | ProteinID:KRH42212.1 | PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | TMHMM:TMhelix |
| UniParc:UPI00023386C8 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:5799032..5800009
Molecular Weight (calculated)
24093.7 Da
IEP (calculated)
9.201
GRAVY (calculated)
0.465
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLGGRTNN GISTNHVEIP IHISNGVELK PIQEVALAES SSIIDYSQRA QWLRAAVLGA NDGLVSVASL MMGVGAVKKD ISAMLLAGFA GLVAGACSMA
101: IGEFVSVYTQ YDIEMTQIKR EREANNNRGV NEETQREKLP NPFQAALASA LAFSVGALVP LIAAVFIRNH KIRMGVVAAA VSLALLVFGG VGAVLGKTPV
201: TRSCLRVLVG GWMAMAITFG LTKLIGSADL
101: IGEFVSVYTQ YDIEMTQIKR EREANNNRGV NEETQREKLP NPFQAALASA LAFSVGALVP LIAAVFIRNH KIRMGVVAAA VSLALLVFGG VGAVLGKTPV
201: TRSCLRVLVG GWMAMAITFG LTKLIGSADL
001: MTSNVQLSET NSPRNQKTRP RAEKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
Arabidopsis Description
Vacuolar iron transporter homolog 2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF6]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.