Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 95.75 | 96.67 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 95.75 | 96.67 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 95.28 | 96.19 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 94.81 | 95.71 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 81.13 | 94.51 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 76.89 | 84.9 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 85.38 | 79.04 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 74.06 | 75.85 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 73.58 | 75.0 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 75.0 | 74.3 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 75.94 | 70.31 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 58.96 | 61.27 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 53.77 | 58.76 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 53.77 | 58.76 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 53.3 | 58.25 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 53.3 | 58.25 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 53.3 | 58.25 |
| Bra012271.1-P | Field mustard | cytosol, peroxisome, vacuole | 54.72 | 58.0 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 54.72 | 58.0 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 52.83 | 57.73 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.83 | 57.14 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.83 | 56.0 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.36 | 55.5 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 50.94 | 55.38 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 54.72 | 55.24 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 51.42 | 55.05 |
| KRH35158 | Soybean | plasma membrane | 51.42 | 55.05 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 51.89 | 54.73 |
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 51.89 | 54.73 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 51.89 | 54.73 |
| Bra016431.1-P | Field mustard | cytosol | 28.3 | 54.55 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 50.94 | 54.0 |
| Solyc04g051180.1.1 | Tomato | extracellular | 41.04 | 52.73 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 52.83 | 51.14 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 47.17 | 51.02 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.06 | 50.73 |
| VIT_18s0076g00320.t01 | Wine grape | cytosol, peroxisome, vacuole | 52.83 | 50.68 |
| PGSC0003DMT400008929 | Potato | cytosol, peroxisome, vacuole | 54.25 | 50.66 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 54.72 | 49.79 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 51.89 | 49.77 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 51.42 | 49.32 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 49.53 | 49.3 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 48.58 | 49.05 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 50.47 | 48.86 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 51.42 | 48.66 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 36.79 | 48.45 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 49.53 | 48.39 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 49.06 | 48.37 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 52.36 | 48.26 |
| KRH58337 | Soybean | plasma membrane | 51.89 | 48.03 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 50.47 | 47.98 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 48.58 | 47.91 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 49.06 | 47.49 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 49.06 | 47.49 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 49.06 | 47.49 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 48.58 | 47.47 |
| KRH42212 | Soybean | plasma membrane | 51.42 | 47.39 |
| KRH42214 | Soybean | extracellular | 36.79 | 47.27 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 50.94 | 47.16 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.83 | 46.86 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 48.11 | 46.79 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 51.42 | 46.78 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 46.23 | 46.23 |
| GSMUA_Achr10P... | Banana | plasma membrane | 57.08 | 46.18 |
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 50.0 | 45.89 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 46.23 | 45.16 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 47.17 | 44.84 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 48.58 | 44.59 |
| TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 48.58 | 44.59 |
| KRH58340 | Soybean | plasma membrane | 49.53 | 44.49 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 43.4 | 43.6 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 32.55 | 43.4 |
| KRH10486 | Soybean | plasma membrane | 37.26 | 42.7 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 33.49 | 39.44 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 36.79 | 37.86 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 34.43 | 35.78 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 32.55 | 32.86 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G432000.1 | EnsemblPlantsGene:TraesCS2D01G432000 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:544565731..544566528
Molecular Weight (calculated)
21142.8 Da
IEP (calculated)
5.899
GRAVY (calculated)
0.732
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNNTKLAA VADAENPAVV CGGVDDSVSE SSIDFAGRAN WLRAAVLGAN DGLVSTASLM LGVSAVKPEA RAMVVSGFAG LLAGACSMAI GEYVSVCSQR
101: HVEIAELDQA GKRGGDEEKA LPSPAQAAAA SALAFSVGAL LPLLAAGFIE GYNLRVAVVV VVATLALAAF GCMGAVLGRA PVARSCARVV VGGLAAMAVT
201: FGFMRLFRAS GV
101: HVEIAELDQA GKRGGDEEKA LPSPAQAAAA SALAFSVGAL LPLLAAGFIE GYNLRVAVVV VVATLALAAF GCMGAVLGRA PVARSCARVV VGGLAAMAVT
201: FGFMRLFRAS GV
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.