Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 91.33 | 92.27 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 91.33 | 92.27 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 90.82 | 91.75 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 90.82 | 91.75 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 90.82 | 91.75 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 89.29 | 90.21 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 77.55 | 76.0 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 76.53 | 75.0 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 75.51 | 74.75 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 65.82 | 60.85 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 63.27 | 60.78 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 59.18 | 60.42 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 66.84 | 60.37 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 66.33 | 59.91 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 61.22 | 58.25 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 61.22 | 57.97 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 61.22 | 57.69 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 35.71 | 56.0 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 60.2 | 55.14 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 60.71 | 54.34 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 58.16 | 54.29 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 58.16 | 54.29 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 58.16 | 54.29 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 57.65 | 53.81 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 58.16 | 53.77 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 57.14 | 53.33 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 57.14 | 53.33 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 49.49 | 53.3 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 61.73 | 52.84 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 57.14 | 52.83 |
| KRH10486 | Soybean | plasma membrane | 47.96 | 50.81 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 54.08 | 50.0 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 49.49 | 48.74 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 56.12 | 48.03 |
| GSMUA_Achr10P... | Banana | plasma membrane | 63.78 | 47.71 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 46.94 | 44.44 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 50.0 | 44.34 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 49.49 | 43.3 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 51.53 | 42.62 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 50.0 | 36.43 |
Protein Annotations
| MapMan:24.2.12.3 | EntrezGene:844014 | ProteinID:AAF04441.1 | ProteinID:AEE35890.1 | ArrayExpress:AT1G76800 | EnsemblPlantsGene:AT1G76800 |
| RefSeq:AT1G76800 | TAIR:AT1G76800 | RefSeq:AT1G76800-TAIR-G | EnsemblPlants:AT1G76800.1 | TAIR:AT1G76800.1 | Unigene:At.34609 |
| EMBL:BT014942 | EMBL:BT015634 | InterPro:Ccc1_fam | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006880 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010039 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0055072 | GO:GO:0071281 | GO:GO:0071369 |
| GO:GO:0071421 | GO:GO:0071732 | RefSeq:NP_177806.1 | PFAM:PF01988 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | UniProt:Q9SRD3 | TMHMM:TMhelix | UniParc:UPI00000A1227 | SEG:seg |
Description
Vacuolar iron transporter homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRD3]
Coordinates
chr1:+:28829243..28830278
Molecular Weight (calculated)
20586.3 Da
IEP (calculated)
7.349
GRAVY (calculated)
0.537
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQSGSNTNM DIEKESTTFD YSKRSQWLRA AVLGANDGLV STASLMMGVG AVKHDVKAMI LSGFAGMVAG ACSMAIGEFV SVYSQYDIEV AQMERDSVEI
101: EKEKLPSPMQ AAAASALAFS AGAIVPLLAA AFVKEYKMRI ISVVVAVTVA LMVFGWLGAA LGKAPAVRSS ARVLFGGWLA MAVTFGLTKL IGLYGL
101: EKEKLPSPMQ AAAASALAFS AGAIVPLLAA AFVKEYKMRI ISVVVAVTVA LMVFGWLGAA LGKAPAVRSS ARVLFGGWLA MAVTFGLTKL IGLYGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.