Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 99.05 | 99.05 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 84.76 | 97.8 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 96.67 | 96.67 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 96.67 | 95.75 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 96.67 | 95.75 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 87.62 | 86.79 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 83.81 | 85.44 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 86.19 | 79.04 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 76.19 | 77.29 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 77.14 | 75.7 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 74.76 | 75.48 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 77.62 | 71.18 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 61.43 | 63.24 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 55.24 | 59.79 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 55.24 | 59.79 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 54.76 | 59.28 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 54.76 | 59.28 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 54.76 | 59.28 |
| Bra012271.1-P | Field mustard | cytosol, peroxisome, vacuole | 56.19 | 59.0 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 56.19 | 59.0 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 54.29 | 58.76 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.29 | 58.16 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.29 | 57.0 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 52.38 | 56.41 |
| Bra016431.1-P | Field mustard | cytosol | 29.52 | 56.36 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 56.19 | 56.19 |
| KRH35158 | Soybean | plasma membrane | 52.86 | 56.06 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 52.86 | 56.06 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 53.33 | 56.0 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 53.33 | 55.72 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 53.33 | 55.72 |
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 53.33 | 55.72 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 52.38 | 55.0 |
| Solyc04g051180.1.1 | Tomato | extracellular | 42.38 | 53.94 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 54.29 | 52.05 |
| VIT_18s0076g00320.t01 | Wine grape | cytosol, peroxisome, vacuole | 54.76 | 52.04 |
| PGSC0003DMT400008929 | Potato | cytosol, peroxisome, vacuole | 55.71 | 51.54 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 47.62 | 51.02 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.52 | 50.73 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 53.33 | 50.68 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 55.71 | 50.21 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 50.48 | 49.77 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 52.86 | 49.55 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 51.43 | 49.32 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 50.95 | 49.31 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 50.48 | 49.3 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 53.81 | 49.13 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 37.62 | 49.07 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 49.05 | 49.05 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 51.9 | 48.88 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 50.48 | 48.85 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 50.0 | 48.84 |
| KRH58337 | Soybean | plasma membrane | 52.86 | 48.47 |
| KRH42212 | Soybean | plasma membrane | 52.86 | 48.26 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 50.0 | 48.17 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 52.38 | 48.03 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 50.0 | 47.95 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 50.0 | 47.95 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 50.0 | 47.95 |
| KRH42214 | Soybean | extracellular | 37.62 | 47.88 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 54.29 | 47.7 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 52.86 | 47.64 |
| GSMUA_Achr10P... | Banana | plasma membrane | 59.05 | 47.33 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 47.62 | 47.17 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 47.62 | 46.08 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 50.0 | 45.45 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 48.1 | 45.29 |
| KRH58340 | Soybean | plasma membrane | 50.48 | 44.92 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 44.76 | 44.55 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 50.0 | 44.49 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 33.33 | 44.03 |
| KRH10486 | Soybean | plasma membrane | 38.1 | 43.24 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 53.33 | 41.64 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 34.76 | 40.56 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 37.62 | 38.35 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.24 | 36.27 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 34.29 | 34.29 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G455200.1 | EnsemblPlantsGene:TraesCS2B01G455200 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:649755487..649756119
Molecular Weight (calculated)
20915.5 Da
IEP (calculated)
6.467
GRAVY (calculated)
0.752
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNDTKLAA VADAENPAVV CGNVDDSKSS IDFAGRANWL RAAVLGANDG LVSTASLMLG VSAVKPDARA MVVSGFAGLL AGACSMAIGE YVSVCSQRDV
101: EIAELDQAGK RGGDEEKALP SPAQAAAASA LAFSVGALLP LLAAGFIVGY NLRVAVVVVV ATLALAAFGC VGAVLGRAPV ARSCARVVVG GLAAMAVTFG
201: FMRLFRASGV
101: EIAELDQAGK RGGDEEKALP SPAQAAAASA LAFSVGALLP LLAAGFIVGY NLRVAVVVVV ATLALAAFGC VGAVLGRAPV ARSCARVVVG GLAAMAVTFG
201: FMRLFRASGV
001: MTSNVQLSET NSPRNQKTRP RAEKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
Arabidopsis Description
Vacuolar iron transporter homolog 2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF6]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.