Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G000300.1 | Wheat | nucleus | 66.67 | 70.83 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 61.14 | 64.72 |
| Os06t0101800-01 | Rice | nucleus | 25.85 | 40.39 |
| KRH06324 | Soybean | cytosol | 16.58 | 34.83 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 33.87 | 31.1 |
| AT1G02210.1 | Thale cress | cytosol, nucleus, plastid | 4.81 | 31.03 |
| CDY15223 | Canola | nucleus | 11.59 | 30.66 |
| Bra010895.1-P | Field mustard | nucleus | 6.6 | 30.08 |
| CDX90132 | Canola | nucleus | 6.6 | 30.08 |
| EER87676 | Sorghum | plastid | 33.87 | 29.46 |
| CDY32449 | Canola | nucleus | 11.59 | 29.02 |
| CDY32450 | Canola | nucleus | 11.59 | 29.02 |
| CDY11741 | Canola | nucleus | 7.13 | 28.78 |
| Bra032615.1-P | Field mustard | nucleus | 11.41 | 28.57 |
| CDY15220 | Canola | nucleus | 10.16 | 28.22 |
| KRH47750 | Soybean | cytosol | 15.15 | 27.6 |
| CDY59815 | Canola | cytosol | 12.83 | 26.97 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 12.3 | 26.64 |
| CDY07138 | Canola | nucleus | 13.55 | 26.39 |
| Bra036328.1-P | Field mustard | nucleus | 13.55 | 26.39 |
| CDY55325 | Canola | nucleus | 11.76 | 25.98 |
| AT4G01520.1 | Thale cress | nucleus | 13.9 | 25.83 |
| CDY55326 | Canola | nucleus | 11.05 | 25.62 |
| Bra033299.1-P | Field mustard | nucleus | 11.41 | 25.5 |
| CDX89994 | Canola | nucleus | 11.41 | 25.5 |
| Bra033302.1-P | Field mustard | nucleus | 11.76 | 25.38 |
| Bra027596.1-P | Field mustard | nucleus | 10.87 | 25.21 |
| Bra036326.1-P | Field mustard | nucleus | 16.58 | 25.14 |
| CDY15214 | Canola | nucleus | 12.66 | 23.99 |
| AT3G04430.1 | Thale cress | nucleus | 8.38 | 23.74 |
| CDY07135 | Canola | nucleus | 15.69 | 23.72 |
| CDX89991 | Canola | nucleus | 11.05 | 23.05 |
| Bra033305.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 11.41 | 22.7 |
| AT1G02230.1 | Thale cress | nucleus | 13.9 | 21.73 |
| CDX89996 | Canola | nucleus | 9.98 | 21.71 |
| Bra033297.1-P | Field mustard | nucleus | 8.56 | 21.33 |
| KRH47748 | Soybean | cytosol | 15.33 | 21.23 |
| KRH47747 | Soybean | nucleus | 18.72 | 21.13 |
| CDY59812 | Canola | cytosol | 16.76 | 20.84 |
| Bra033306.1-P | Field mustard | nucleus | 14.26 | 20.83 |
| KRH06327 | Soybean | cytosol | 14.62 | 20.5 |
| KRH06326 | Soybean | nucleus | 15.69 | 20.42 |
| CDY15217 | Canola | nucleus | 12.66 | 20.34 |
| CDY59814 | Canola | cytosol | 15.33 | 20.24 |
| Bra036327.1-P | Field mustard | cytosol | 15.33 | 20.24 |
| CDX89995 | Canola | nucleus | 12.66 | 20.0 |
| CDX97252 | Canola | cytosol | 15.15 | 19.91 |
| Bra033298.1-P | Field mustard | nucleus | 13.19 | 19.79 |
| CDY07136 | Canola | cytosol | 14.97 | 19.72 |
| AT1G02250.1 | Thale cress | nucleus | 12.66 | 19.61 |
| AT3G04420.1 | Thale cress | nucleus | 11.76 | 19.3 |
| Bra008553.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.79 | 18.74 |
| CDY15224 | Canola | cytosol | 12.48 | 18.72 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 16.04 | 18.52 |
| AT1G01010.1 | Thale cress | nucleus | 13.9 | 18.18 |
| AT4G01550.1 | Thale cress | cytosol, golgi, nucleus | 14.79 | 18.16 |
| AT4G01540.1 | Thale cress | cytosol | 15.15 | 17.97 |
| CDY15212 | Canola | nucleus | 13.19 | 17.41 |
| CDY15215 | Canola | nucleus | 13.19 | 17.41 |
| Bra033303.1-P | Field mustard | nucleus | 11.76 | 17.19 |
| CDX89990 | Canola | nucleus | 11.76 | 16.67 |
| Bra033308.1-P | Field mustard | nucleus | 11.76 | 16.67 |
| CDY15218 | Canola | nucleus | 10.52 | 16.16 |
| AT1G02220.1 | Thale cress | nucleus | 11.23 | 15.99 |
| Bra033300.1-P | Field mustard | nucleus | 13.01 | 15.9 |
| CDX89993 | Canola | nucleus | 12.66 | 15.2 |
| CDX89999 | Canola | nucleus | 12.66 | 14.95 |
| Bra033296.1-P | Field mustard | nucleus | 12.66 | 14.95 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 11.23 | 14.82 |
| CDY15225 | Canola | nucleus | 9.8 | 13.78 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF54 | SUPFAM:SSF101941 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7D01G000200 | EnsemblPlants:TraesCS7D01G000200.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:241796..245772
Molecular Weight (calculated)
60399.9 Da
IEP (calculated)
4.605
GRAVY (calculated)
-0.520
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTTAAGSES SSSSTTAAAA VLPVGFRFRP TDEELVRHYL KAKIAGRAHP DLLAIPDVDL AAVEPWDLPA RSVIKSDDPE WFFFARRDRP KYPGKSSRSC
101: RSTAAGYWKA TGKDRLIRAP GPGGCRGKGA LIGVKKTLVF HRGRAPRGAR TPWIMHEYTA TDPNPQSQSQ SQSQSAGPQN DSFVLYRLFN KQDEETPAPI
201: SGPPSTSPPA NPPLQQADDT ASASMVEDKA SPSDSSQLTP TNATTDHSST AHLPAAAGDA EQTADQEAAF TASLEQLPDI QLQAEQQRHD EFPIFNSPMR
301: PYTDLPFVGN MGDEQEDFSM YLNNTIGEQD VQDMLLNPAG STTAPLPFWS ASSGSWTPYD LQDMGAAPWT QQQPTAPADL MDPQQGIAAR RIRLAYAVER
401: ASASQPVLAC HSESEEGEGE SAGCSTESSS SNHEEDHVDD AVFQTMAGDL MHNMAPAQAL VVSPVQVADK LEHLSFNLND NNILEQEDAK LPGGAVLKQD
501: SGRNGHDQDG LVRNSDCVPG PGDSSSETAV RRSLWLALLV MAPLLVLVLA GVWRSLSYRP V
101: RSTAAGYWKA TGKDRLIRAP GPGGCRGKGA LIGVKKTLVF HRGRAPRGAR TPWIMHEYTA TDPNPQSQSQ SQSQSAGPQN DSFVLYRLFN KQDEETPAPI
201: SGPPSTSPPA NPPLQQADDT ASASMVEDKA SPSDSSQLTP TNATTDHSST AHLPAAAGDA EQTADQEAAF TASLEQLPDI QLQAEQQRHD EFPIFNSPMR
301: PYTDLPFVGN MGDEQEDFSM YLNNTIGEQD VQDMLLNPAG STTAPLPFWS ASSGSWTPYD LQDMGAAPWT QQQPTAPADL MDPQQGIAAR RIRLAYAVER
401: ASASQPVLAC HSESEEGEGE SAGCSTESSS SNHEEDHVDD AVFQTMAGDL MHNMAPAQAL VVSPVQVADK LEHLSFNLND NNILEQEDAK LPGGAVLKQD
501: SGRNGHDQDG LVRNSDCVPG PGDSSSETAV RRSLWLALLV MAPLLVLVLA GVWRSLSYRP V
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.