Factsheet for Bra033302.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	90.77	83.69
CDX89991	Canola	nucleus	84.23	81.41
CDY15223	Canola	nucleus	59.62	73.11
Bra033299.1-P	Field mustard	nucleus	42.69	44.22
Bra032615.1-P	Field mustard	nucleus	37.69	43.75
Bra010895.1-P	Field mustard	nucleus	20.38	43.09
Bra033298.1-P	Field mustard	nucleus	55.0	38.24
AT1G02250.1	Thale cress	nucleus	48.08	34.53
Bra033303.1-P	Field mustard	nucleus	48.46	32.81
Bra033306.1-P	Field mustard	nucleus	46.15	31.25
Bra033308.1-P	Field mustard	nucleus	47.31	31.06
AT1G02230.1	Thale cress	nucleus	42.69	30.92
Bra027596.1-P	Field mustard	nucleus	26.15	28.1
AT3G04420.1	Thale cress	nucleus	36.15	27.49
KRH06324	Soybean	cytosol	25.38	24.72
AT1G02220.1	Thale cress	nucleus	36.92	24.37
Bra033300.1-P	Field mustard	nucleus	41.92	23.75
Bra036328.1-P	Field mustard	nucleus	25.0	22.57
KRH47750	Soybean	cytosol	23.46	19.81
Bra036326.1-P	Field mustard	nucleus	28.08	19.73
Bra033297.1-P	Field mustard	nucleus	16.54	19.11
Bra036327.1-P	Field mustard	cytosol	28.85	17.65
KRH47748	Soybean	cytosol	25.0	16.05
KRH06326	Soybean	nucleus	26.54	16.01
Bra033296.1-P	Field mustard	nucleus	29.23	16.0
KRH06327	Soybean	cytosol	24.62	16.0
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	26.92	15.8
Os06t0101800-01	Rice	nucleus	21.15	15.32
KRH47747	Soybean	nucleus	23.85	12.47
TraesCS7A01G000300.1	Wheat	nucleus	24.23	11.93
TraesCS7D01G000200.1	Wheat	plastid	25.38	11.76
HORVU7Hr1G000910.1	Barley	nucleus	23.85	11.7
TraesCS4A01G499900.1	Wheat	plastid	25.38	11.46
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	23.46	9.98
EER87676	Sorghum	plastid	23.46	9.46

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033302	EnsemblPlants:Bra033302.1	EnsemblPlants:Bra033302.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWW7	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF57	SUPFAM:SSF101941
UniParc:UPI0002544F73	SEG:seg	:	:	:	:

Description

AT1G02230 (E=4e-052) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4382280..4383309

Molecular Weight (calculated)

29075.4 Da

IEP (calculated)

5.223

GRAVY (calculated)

-0.995

Length

260 amino acids

Sequence
(BLAST)

001: MENRVGFRFI PTDEEIVDYY IRLKNRGGSD TNHVDKAIRA VDICSFDPWE LPSKSRRESR DQVWYFFCRK DNRGERQSRK TKSGFWKKTG PTMDIFQKRG
101: DREKIGEKRV LVFHLSGSKS KSDWVMHEYV ATFLPPTDQM TYTLCKLKFK GDASDLPSSS GGDGRGGDGG CGNGSGGGGC DGGGGDGCDG GGGGGGIDEH
201: NQYLITHMNN SGGYEDPSQF NVSTDDFNCF LNYNDDEEEQ EQGNTMFMQY DRNTYRPNCP

Best Arabidopsis Sequence Match ( AT1G01010.1 )
(BLAST)

001: MEDQVGFGFR PNDEELVGHY LRNKIEGNTS RDVEVAISEV NICSYDPWNL RFQSKYKSRD AMWYFFSRRE NNKGNRQSRT TVSGKWKLTG ESVEVKDQWG
101: FCSEGFRGKI GHKRVLVFLD GRYPDKTKSD WVIHEFHYDL LPEHQRTYVI CRLEYKGDDA DILSAYAIDP TPAFVPNMTS SAGSVVNQSR QRNSGSYNTY
201: SEYDSANHGQ QFNENSNIMQ QQPLQGSFNP LLEYDFANHG GQWLSDYIDL QQQVPYLAPY ENESEMIWKH VIEENFEFLV DERTSMQQHY SDHRPKKPVS
301: GVLPDDSSDT ETGSMIFEDT SSSTDSVGSS DEPGHTRIDD IPSLNIIEPL HNYKAQEQPK QQSKEKVISS QKSECEWKMA EDSIKIPPST NTVKQSWIVL
401: ENAQWNYLKN MIIGVLLFIS VISWIILVG

Arabidopsis Description

NAC001NAC domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV96]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.