CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87801
EER90743
EER92238
EER92848
EER98394
EER98395
EER99823
EES03400
EES09846
EES10004
EES11733
EES13114
EES18686
EES19099
KXG27212
KXG31702
OQU79719
OQU81217
OQU86697

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01010.1	EES19099	AT1G10030.1	21798944
AT1G01010.1	OQU79719	AT1G10030.1	21798944
AT1G01010.1	EER87801	AT1G12390.1	21798944
AT1G01010.1	KXG27212	AT1G16240.1	21798944
AT1G01010.1	EES03400	AT1G17080.1	21798944
AT1G01010.1	EES18686	AT1G17080.1	21798944
AT1G01010.1	KXG31702	AT1G17080.1	21798944
AT1G01010.1	OQU86697	AT1G77350.1	21798944
AT1G01010.1	EES13114	AT2G20740.1	21798944
AT1G01010.1	EER98394	AT2G32380.1	21798944
AT1G01010.1	EER98395	AT2G32380.1	21798944
AT1G01010.1	EER92238	AT3G07950.1	21798944
AT1G01010.1	EER99823	AT3G07950.1	21798944
AT1G01010.1	EES11733	AT3G07950.1	21798944
AT1G01010.1	EER90743	AT4G14730.1	21798944
AT1G01010.1	EES10004	AT4G14730.1	21798944
AT1G01010.1	EER92848	AT5G43460.1	21798944
AT1G01010.1	OQU81217	AT5G43460.1	21798944
AT1G01010.1	EES09846	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	60.16	63.5
Os06t0101800-01	Rice	nucleus	22.95	41.23
TraesCS7A01G000300.1	Wheat	nucleus	28.68	35.04
HORVU7Hr1G000910.1	Barley	nucleus	28.06	34.15
TraesCS4A01G499900.1	Wheat	plastid	30.39	34.03
TraesCS7D01G000200.1	Wheat	plastid	29.46	33.87
KRH06324	Soybean	cytosol	13.64	32.96
AT1G02210.1	Thale cress	cytosol, nucleus, plastid	4.19	31.03
Bra010895.1-P	Field mustard	nucleus	5.89	30.89
CDX90132	Canola	nucleus	5.89	30.89
CDY32449	Canola	nucleus	10.54	30.36
CDY32450	Canola	nucleus	10.39	29.91
Bra032615.1-P	Field mustard	nucleus	10.23	29.46
CDY11741	Canola	nucleus	6.2	28.78
CDY55325	Canola	nucleus	11.01	27.95
CDY15220	Canola	nucleus	8.68	27.72
CDY55326	Canola	nucleus	10.39	27.69
KRH47750	Soybean	cytosol	13.18	27.6
CDY15223	Canola	nucleus	8.99	27.36
CDY59815	Canola	cytosol	11.01	26.59
CDX89994	Canola	nucleus	10.23	26.29
Bra033299.1-P	Field mustard	nucleus	9.92	25.5
CDY07138	Canola	nucleus	11.32	25.35
AT3G04430.1	Thale cress	nucleus	7.75	25.25
AT4G01520.1	Thale cress	nucleus	11.78	25.17
Bra036328.1-P	Field mustard	nucleus	11.16	25.0
CDY15210	Canola	cytosol, nucleus, plastid	9.77	24.32
Bra027596.1-P	Field mustard	nucleus	8.99	23.97
Bra033297.1-P	Field mustard	nucleus	8.22	23.56
Bra033302.1-P	Field mustard	nucleus	9.46	23.46
CDX89996	Canola	nucleus	8.99	22.48
AT1G02230.1	Thale cress	nucleus	12.25	22.01
KRH06327	Soybean	cytosol	13.64	22.0
KRH47748	Soybean	cytosol	13.64	21.73
KRH06326	Soybean	nucleus	14.42	21.58
CDX89991	Canola	nucleus	8.99	21.56
Bra036326.1-P	Field mustard	nucleus	11.94	20.81
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	8.99	20.57
AT3G04420.1	Thale cress	nucleus	10.85	20.47
CDY15214	Canola	nucleus	9.3	20.27
AT1G02250.1	Thale cress	nucleus	11.32	20.17
CDY15217	Canola	nucleus	10.7	19.77
KRH47747	Soybean	nucleus	15.04	19.52
CDX89995	Canola	nucleus	10.7	19.44
Bra036327.1-P	Field mustard	cytosol	12.71	19.29
CDY59814	Canola	cytosol	12.71	19.29
CDY07135	Canola	nucleus	11.01	19.14
Bra033303.1-P	Field mustard	nucleus	11.32	19.01
CDX97252	Canola	cytosol	12.56	18.97
CDX89990	Canola	nucleus	11.47	18.69
Bra033308.1-P	Field mustard	nucleus	11.47	18.69
CDY07136	Canola	cytosol	12.25	18.54
CDY01928	Canola	cytosol, nucleus, vacuole	13.95	18.52
Bra033298.1-P	Field mustard	nucleus	10.7	18.45
AT4G01550.1	Thale cress	cytosol, golgi, nucleus	13.02	18.38
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	12.56	18.28
Bra033306.1-P	Field mustard	nucleus	10.85	18.23
AT4G01540.1	Thale cress	cytosol	13.33	18.18
Bra033300.1-P	Field mustard	nucleus	12.71	17.86
AT1G02220.1	Thale cress	nucleus	10.85	17.77
CDY15224	Canola	cytosol	10.23	17.65
CDY15221	Canola	cytosol, nucleus, peroxisome	11.47	17.41
CDY59812	Canola	cytosol	11.94	17.07
AT1G01010.1	Thale cress	nucleus	11.32	17.02
CDX89993	Canola	nucleus	12.25	16.92
CDY15212	Canola	nucleus	11.01	16.71
CDY15218	Canola	nucleus	8.84	15.62
CDY15215	Canola	nucleus	10.23	15.53
CDY15225	Canola	nucleus	9.3	15.04
Bra033296.1-P	Field mustard	nucleus	10.08	13.68
CDX89999	Canola	nucleus	9.92	13.47

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:C5Z212	EnsemblPlants:EER87676	ProteinID:EER87676	ProteinID:EER87676.2
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF54	EnsemblPlantsGene:SORBI_3010G000100	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0007F20B6F	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:13093..16973

Molecular Weight (calculated)

70112.3 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.422

Length

645 amino acids

Sequence
(BLAST)

001: MPSTSISSAS AAGKGGSKAM QPPPQLPAAL PVGFRFRPTD EELVRHYLKP KIAGHAHADL LLIPDVDLSA CEPWELPAKA LIRSGDPEWF FFAPLDRKYP
101: GGHRSNRSTA AGYWKATGKD RLIRSRRAGT LIGVKKTLVF HRGRAPRGHR TAWIMHEYRT AEPQLQQGQN GSFVLYRLFN KNEGESEASD AADSPSTSSP
201: AIAPAVKAEN LSQPASAKMS HLLATVSSNE PTSNQGDDHL LDVLSQLPDL QREHKFDGFP TITSPMRPYT DHPFLGNAGE QDLSVYIDSI IAHQDLEDLL
301: ASPCLADMVE QATVNVEPHP TSLPILDNSS NSKRLAENSR GKVGSETLLL IKGTDDTGAA ASCSATKILQ ADKDNINHHT GAQSNLASNA SAQVSHFYNQ
401: YQLQSAFIPE TEPPNSGALC SAASLTPYPQ HLFNGMVAPA RIDISDSDVF NGLQGWAAEP SKDPHQGNAP RRIRLVHSIQ RASVIEPVLT SHLEGEDEAG
501: LCYSTDSSST NNNEDYANVF SQSMAGEAMH IQGGGVIPTQ VVSSTEITEK LQDFTLDEGT LLHGELHHGG NLKQRHKQEH TEETSQDVRE GMQQSVHVTG
601: VAVPSLRRQR ESARIGSVVR LLFLALVVIL VFVGLWKCSS YKLFH

Best Arabidopsis Sequence Match ( AT4G35580.2 )
(BLAST)

001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV

Arabidopsis Description

NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.