CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77350.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040435_P003	Maize	extracellular	100.0	100.0
TraesCS1D01G303800.1	Wheat	extracellular	91.74	91.74
TraesCS1A01G304300.1	Wheat	extracellular	91.74	91.74
TraesCS1B01G314800.1	Wheat	extracellular	90.91	90.91
HORVU1Hr1G069080.4	Barley	extracellular	71.9	86.14
Os05t0486200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	85.95	85.25
VIT_19s0085g00270.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	72.73	72.73
Solyc11g005000.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	67.77	71.93
PGSC0003DMT400015485	Potato	endoplasmic reticulum, extracellular, vacuole	71.07	71.07
CDY08189	Canola	extracellular	68.59	68.59
Bra016411.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	68.59	68.59
Bra017936.1-P	Field mustard	extracellular	68.59	68.59
CDY01319	Canola	extracellular	67.77	67.77
CDX96580	Canola	endoplasmic reticulum, extracellular, vacuole	67.77	67.77
KRH53288	Soybean	endoplasmic reticulum, extracellular, vacuole	69.42	67.2
AT1G77350.1	Thale cress	extracellular	66.94	66.39
Bra012289.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	66.12	66.12
CDY00395	Canola	extracellular	66.12	65.57
CDY38817	Canola	extracellular	65.29	65.29
KRH64617	Soybean	extracellular	70.25	61.15
CDY04659	Canola	extracellular	29.75	57.14
GSMUA_Achr10P...	Banana	extracellular	75.21	49.46

Protein Annotations

MapMan:35.2	EntrezGene:8074532	UniProt:C5XH84	ProteinID:EES02763.1	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0016020	GO:GO:0016021	InterPro:KRTCAP2
EnsemblPlants:OQU86697	ProteinID:OQU86697	ProteinID:OQU86697.1	PFAM:PF09775	PANTHER:PTHR32001	EnsemblPlantsGene:SORBI_3003G129800
unigene:Sbi.8957	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000182B02E	RefSeq:XP_002457643.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:12147510..12150473

Molecular Weight (calculated)

13111.4 Da

IEP (calculated)

8.891

GRAVY (calculated)

0.842

Length

121 amino acids

Sequence
(BLAST)

001: MASTGRSMLL SLLLFAVTLS LLEMYRAKFA SSELMTIAGG FVCSLLFLLL LTFIGNYQEA SGDRTGWGAV VVAQLVALIV AGTVHRVCIT TCFLFSAGLL
101: YEVDKLSGMI LARSESKVRR H

Best Arabidopsis Sequence Match ( AT1G77350.2 )
(BLAST)

001: MAGAVGTSML GSLIVFTVIL SLQEIYRGKL ASSELFTILG GFTSSLLFLF SLTFIGNFQE SSGIKSGWGA VILAEIIALI AAGTVHRVCI TTCFLFSAGL
101: LYEVNKISGY MLSKTESKSK RH

Arabidopsis Description

At1g77350/F2P24_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVX3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.