Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016411.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 84.43 | 85.12 |
| CDX96580 | Canola | endoplasmic reticulum, extracellular, vacuole | 84.43 | 85.12 |
| CDY38817 | Canola | extracellular | 84.43 | 85.12 |
| Bra017936.1-P | Field mustard | extracellular | 82.79 | 83.47 |
| CDY08189 | Canola | extracellular | 82.79 | 83.47 |
| CDY01319 | Canola | extracellular | 81.97 | 82.64 |
| Bra012289.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 81.15 | 81.82 |
| CDY00395 | Canola | extracellular | 81.15 | 81.15 |
| VIT_19s0085g00270.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 74.59 | 75.21 |
| Solyc11g005000.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 69.67 | 74.56 |
| Os05t0486200-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 69.67 | 69.67 |
| PGSC0003DMT400015485 | Potato | endoplasmic reticulum, extracellular, vacuole | 68.85 | 69.42 |
| KRH53288 | Soybean | endoplasmic reticulum, extracellular, vacuole | 70.49 | 68.8 |
| OQU86697 | Sorghum | extracellular | 66.39 | 66.94 |
| Zm00001d040435_P003 | Maize | extracellular | 66.39 | 66.94 |
| CDY04659 | Canola | extracellular | 34.43 | 66.67 |
| TraesCS1A01G304300.1 | Wheat | extracellular | 64.75 | 65.29 |
| TraesCS1B01G314800.1 | Wheat | extracellular | 64.75 | 65.29 |
| TraesCS1D01G303800.1 | Wheat | extracellular | 64.75 | 65.29 |
| HORVU1Hr1G069080.4 | Barley | extracellular | 52.46 | 63.37 |
| KRH64617 | Soybean | extracellular | 72.13 | 63.31 |
| GSMUA_Achr10P... | Banana | extracellular | 72.95 | 48.37 |
Protein Annotations
| MapMan:35.2 | EntrezGene:844071 | UniProt:A0A178WBM5 | ProteinID:AAG29199.1 | ProteinID:AEE35967.1 | ProteinID:AEE35968.1 |
| ArrayExpress:AT1G77350 | EnsemblPlantsGene:AT1G77350 | RefSeq:AT1G77350 | TAIR:AT1G77350 | RefSeq:AT1G77350-TAIR-G | EnsemblPlants:AT1G77350.1 |
| TAIR:AT1G77350.1 | EMBL:AY058172 | EMBL:AY098975 | Unigene:At.16871 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:KRTCAP2 | RefSeq:NP_001031293.1 | RefSeq:NP_565155.1 | ProteinID:OAP15839.1 | PFAM:PF09775 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR32001 | UniProt:Q9FVX3 | TMHMM:TMhelix | UniParc:UPI00000A12FA | SEG:seg | : |
Description
At1g77350/F2P24_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVX3]
Coordinates
chr1:+:29070225..29071899
Molecular Weight (calculated)
13050.2 Da
IEP (calculated)
9.226
GRAVY (calculated)
0.760
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAVGTSML GSLIVFTVIL SLQEIYRGKL ASSELFTILG GFTSSLLFLF SLTFIGNFQE SSGIKSGWGA VILAEIIALI AAGTVHRVCI TTCFLFSAGL
101: LYEVNKISGY MLSKTESKSK RH
101: LYEVNKISGY MLSKTESKSK RH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.