Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033296.1-P | Field mustard | nucleus | 97.68 | 97.68 |
| CDY15215 | Canola | nucleus | 56.0 | 62.59 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 22.53 | 41.31 |
| CDY15212 | Canola | nucleus | 36.84 | 41.18 |
| CDY15214 | Canola | nucleus | 23.79 | 38.18 |
| AT1G01010.1 | Thale cress | nucleus | 30.74 | 34.03 |
| CDY15220 | Canola | nucleus | 14.32 | 33.66 |
| CDY55325 | Canola | nucleus | 17.47 | 32.68 |
| CDY32449 | Canola | nucleus | 15.37 | 32.59 |
| CDY32450 | Canola | nucleus | 15.37 | 32.59 |
| CDY55326 | Canola | nucleus | 16.21 | 31.82 |
| CDY15223 | Canola | nucleus | 14.11 | 31.6 |
| CDX89994 | Canola | nucleus | 16.42 | 31.08 |
| CDY11741 | Canola | nucleus | 9.05 | 30.94 |
| CDX90132 | Canola | nucleus | 8.0 | 30.89 |
| CDY07138 | Canola | nucleus | 17.89 | 29.51 |
| CDY59815 | Canola | cytosol | 16.42 | 29.21 |
| CDX89991 | Canola | nucleus | 15.79 | 27.88 |
| CDY59814 | Canola | cytosol | 23.16 | 25.88 |
| KRH06324 | Soybean | cytosol | 14.11 | 25.09 |
| CDY07136 | Canola | cytosol | 21.89 | 24.41 |
| CDY07135 | Canola | nucleus | 18.74 | 23.99 |
| CDX89995 | Canola | nucleus | 17.89 | 23.94 |
| CDX97252 | Canola | cytosol | 21.26 | 23.65 |
| CDY15224 | Canola | cytosol | 17.89 | 22.73 |
| CDX89990 | Canola | nucleus | 18.53 | 22.22 |
| CDY15218 | Canola | nucleus | 17.05 | 22.19 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 19.58 | 21.88 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 22.11 | 21.6 |
| KRH47750 | Soybean | cytosol | 13.68 | 21.1 |
| CDY59812 | Canola | cytosol | 19.37 | 20.4 |
| CDX89996 | Canola | nucleus | 10.95 | 20.16 |
| CDX89993 | Canola | nucleus | 19.79 | 20.13 |
| KRH47747 | Soybean | nucleus | 19.58 | 18.71 |
| KRH47748 | Soybean | cytosol | 15.79 | 18.52 |
| CDY15217 | Canola | nucleus | 13.47 | 18.34 |
| CDY15225 | Canola | nucleus | 15.16 | 18.05 |
| KRH06326 | Soybean | nucleus | 16.0 | 17.63 |
| Os06t0101800-01 | Rice | nucleus | 13.26 | 17.55 |
| KRH06327 | Soybean | cytosol | 14.32 | 17.0 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 14.74 | 13.26 |
| TraesCS7D01G000200.1 | Wheat | plastid | 14.95 | 12.66 |
| TraesCS4A01G499900.1 | Wheat | plastid | 15.16 | 12.5 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 13.89 | 12.45 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 13.89 | 10.8 |
| EER87676 | Sorghum | plastid | 13.47 | 9.92 |
| CDY07137 | Canola | extracellular, plasma membrane | 5.68 | 8.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DNB4 | EnsemblPlants:CDX89999 | ProteinID:CDX89999 | ProteinID:CDX89999.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150497001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF57 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EF20F1 | SEG:seg | : |
Description
BnaA10g00830D
Coordinates
chrLK031861:+:1174095..1178560
Molecular Weight (calculated)
54119.1 Da
IEP (calculated)
6.032
GRAVY (calculated)
-0.675
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEKPGFEFR PYDEELVGFY LRQKLLGNHS LVDGVIREIK ICSLDPWDLR FQSKIKSRDP VWYFLSLIEN NRGRQSRTTP SGSWKLTGDP VNVNDRWGNL
101: TGFRGKIGYK RVLTFSKAKS SSSSVSEWVM HELHYTHTDL PEHKRTTYVI CRLEYKGDDV NILSTPTFAP TMANSASSAV DQSLQGNSGH YNTLSEYDSG
201: YQFNGNSDMQ QSFQGYSEYF NPTSEYGLAN QSNNWFSNLQ QQQVPYSAPY QDDSDVWRQV VEEDWPSLID ERTCMRVDLI HHRPKKPVTG IFVGDSSDDD
301: TDSTIGKGTW RSTDSVGSKD VPYHAPKDAT PSLSTVEPLY NDSSDDDTDS TIGKGTWRST DSVGSKDVPY HAPKYATPSL STVEPLYNDE PQEQPKQLML
401: QLQGKQKVIN KQKSECEWKR AEDSIKKAPS TYAVKQSWIV LEEISQRKSR WIYLKNIVGL LLFIIFIIGW IILLG
101: TGFRGKIGYK RVLTFSKAKS SSSSVSEWVM HELHYTHTDL PEHKRTTYVI CRLEYKGDDV NILSTPTFAP TMANSASSAV DQSLQGNSGH YNTLSEYDSG
201: YQFNGNSDMQ QSFQGYSEYF NPTSEYGLAN QSNNWFSNLQ QQQVPYSAPY QDDSDVWRQV VEEDWPSLID ERTCMRVDLI HHRPKKPVTG IFVGDSSDDD
301: TDSTIGKGTW RSTDSVGSKD VPYHAPKDAT PSLSTVEPLY NDSSDDDTDS TIGKGTWRST DSVGSKDVPY HAPKYATPSL STVEPLYNDE PQEQPKQLML
401: QLQGKQKVIN KQKSECEWKR AEDSIKKAPS TYAVKQSWIV LEEISQRKSR WIYLKNIVGL LLFIIFIIGW IILLG
001: MEDQVGFGFR PNDEELVGHY LRNKIEGNTS RDVEVAISEV NICSYDPWNL RFQSKYKSRD AMWYFFSRRE NNKGNRQSRT TVSGKWKLTG ESVEVKDQWG
101: FCSEGFRGKI GHKRVLVFLD GRYPDKTKSD WVIHEFHYDL LPEHQRTYVI CRLEYKGDDA DILSAYAIDP TPAFVPNMTS SAGSVVNQSR QRNSGSYNTY
201: SEYDSANHGQ QFNENSNIMQ QQPLQGSFNP LLEYDFANHG GQWLSDYIDL QQQVPYLAPY ENESEMIWKH VIEENFEFLV DERTSMQQHY SDHRPKKPVS
301: GVLPDDSSDT ETGSMIFEDT SSSTDSVGSS DEPGHTRIDD IPSLNIIEPL HNYKAQEQPK QQSKEKVISS QKSECEWKMA EDSIKIPPST NTVKQSWIVL
401: ENAQWNYLKN MIIGVLLFIS VISWIILVG
101: FCSEGFRGKI GHKRVLVFLD GRYPDKTKSD WVIHEFHYDL LPEHQRTYVI CRLEYKGDDA DILSAYAIDP TPAFVPNMTS SAGSVVNQSR QRNSGSYNTY
201: SEYDSANHGQ QFNENSNIMQ QQPLQGSFNP LLEYDFANHG GQWLSDYIDL QQQVPYLAPY ENESEMIWKH VIEENFEFLV DERTSMQQHY SDHRPKKPVS
301: GVLPDDSSDT ETGSMIFEDT SSSTDSVGSS DEPGHTRIDD IPSLNIIEPL HNYKAQEQPK QQSKEKVISS QKSECEWKMA EDSIKIPPST NTVKQSWIVL
401: ENAQWNYLKN MIIGVLLFIS VISWIILVG
Arabidopsis Description
NAC001NAC domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV96]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.