Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07135 | Canola | nucleus | 61.86 | 75.2 |
| CDY59814 | Canola | cytosol | 52.77 | 56.0 |
| CDY07136 | Canola | cytosol | 50.55 | 53.52 |
| CDX97252 | Canola | cytosol | 41.91 | 44.26 |
| CDY59815 | Canola | cytosol | 24.83 | 41.95 |
| CDY07138 | Canola | nucleus | 23.95 | 37.5 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 38.58 | 35.8 |
| CDY15220 | Canola | nucleus | 14.41 | 32.18 |
| CDY32449 | Canola | nucleus | 15.74 | 31.7 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 18.18 | 31.66 |
| CDY32450 | Canola | nucleus | 15.3 | 30.8 |
| CDX89994 | Canola | nucleus | 17.07 | 30.68 |
| CDY15214 | Canola | nucleus | 19.51 | 29.73 |
| CDY55326 | Canola | nucleus | 15.52 | 28.93 |
| CDY55325 | Canola | nucleus | 16.19 | 28.74 |
| KRH06324 | Soybean | cytosol | 16.85 | 28.46 |
| CDY11741 | Canola | nucleus | 8.65 | 28.06 |
| CDX90132 | Canola | nucleus | 7.54 | 27.64 |
| CDY15223 | Canola | nucleus | 12.86 | 27.36 |
| CDX89991 | Canola | nucleus | 15.08 | 25.28 |
| KRH47750 | Soybean | cytosol | 17.07 | 25.0 |
| CDX89995 | Canola | nucleus | 18.4 | 23.38 |
| CDX89996 | Canola | nucleus | 13.3 | 23.26 |
| CDY15215 | Canola | nucleus | 20.84 | 22.12 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 20.62 | 21.88 |
| CDX89993 | Canola | nucleus | 21.73 | 20.98 |
| CDY15218 | Canola | nucleus | 16.85 | 20.82 |
| KRH06327 | Soybean | cytosol | 18.18 | 20.5 |
| CDX89990 | Canola | nucleus | 17.96 | 20.45 |
| Os06t0101800-01 | Rice | nucleus | 16.19 | 20.33 |
| CDY15217 | Canola | nucleus | 15.52 | 20.06 |
| CDX89999 | Canola | nucleus | 20.4 | 19.37 |
| CDY15212 | Canola | nucleus | 18.18 | 19.29 |
| CDY15224 | Canola | cytosol | 15.74 | 18.98 |
| CDY15225 | Canola | nucleus | 16.63 | 18.8 |
| KRH47748 | Soybean | cytosol | 16.19 | 18.02 |
| KRH06326 | Soybean | nucleus | 17.07 | 17.87 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 20.62 | 17.61 |
| KRH47747 | Soybean | nucleus | 19.07 | 17.3 |
| TraesCS4A01G499900.1 | Wheat | plastid | 21.95 | 17.19 |
| TraesCS7D01G000200.1 | Wheat | plastid | 20.84 | 16.76 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 18.85 | 16.04 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 17.74 | 13.09 |
| EER87676 | Sorghum | plastid | 17.07 | 11.94 |
| CDY07137 | Canola | extracellular, plasma membrane | 6.43 | 9.24 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078J626 | UniProt:A0A078J626 | EnsemblPlants:CDY59812 | ProteinID:CDY59812 |
| ProteinID:CDY59812.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00027750001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF109 | SUPFAM:SSF101941 | UniParc:UPI0004EE1204 | SEG:seg | : | : |
Description
BnaA09g51610DBnaA09g51610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J626]
Coordinates
chrLK033808:+:1708..6923
Molecular Weight (calculated)
51811.0 Da
IEP (calculated)
9.603
GRAVY (calculated)
-0.566
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKPVGYRF SPTGLELINH YLKNKILDKL WLVNDAINEI NICAHDPKFL PALSKLDSKD LVWYFFCRRE YHVSEKKKGT KRTTPSGYWK ATGVDRKIRE
101: KGVEIGIKKT LVYHEGKSTN GVWTPWVMHE YHITSLPPTQ RNYVICQVMY KGADGDSLYG NNSNELSHST MVSDLNTVRE INTAPEVEQP REEDFYMSWD
201: DLANPLNEQD DPSLFNPDTF FNDDYCPYQQ QPQAPCDDDY ISKLLSFNGG NHADVLGDLD ITMQEHRNDH RPTKAFTGII VDCSSDNDAK SISATVSIFG
301: ISSTTNNPFR FTISYLGKGI KKRIGISFSQ LKDLLVGKKK LGRTFYLHLN KKIYMNSEIR DYAFLKVKKK TRKPIKKFHY HFVSSSLKNR SIYIHVTPPG
401: VSRQVVMISD RLKVGRKTLR VQARAYGDLI CSDLDVGGLP EMDTSRRRFF L
101: KGVEIGIKKT LVYHEGKSTN GVWTPWVMHE YHITSLPPTQ RNYVICQVMY KGADGDSLYG NNSNELSHST MVSDLNTVRE INTAPEVEQP REEDFYMSWD
201: DLANPLNEQD DPSLFNPDTF FNDDYCPYQQ QPQAPCDDDY ISKLLSFNGG NHADVLGDLD ITMQEHRNDH RPTKAFTGII VDCSSDNDAK SISATVSIFG
301: ISSTTNNPFR FTISYLGKGI KKRIGISFSQ LKDLLVGKKK LGRTFYLHLN KKIYMNSEIR DYAFLKVKKK TRKPIKKFHY HFVSSSLKNR SIYIHVTPPG
401: VSRQVVMISD RLKVGRKTLR VQARAYGDLI CSDLDVGGLP EMDTSRRRFF L
001: MMKDPTGYRF SPTGEEVINH YLKNKILGKT WLVDEAISEI NILNHKPSKD LPKLARIQSE DLEWYFFSPI EYTNPNKMKM KRTTGSGFWK PSGVDRKIRD
101: KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING EPEPELQVEQ PGKENLLGMS
201: VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL
301: PG
101: KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING EPEPELQVEQ PGKENLLGMS
201: VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL
301: PG
Arabidopsis Description
anac067F11O4.3 [Source:UniProtKB/TrEMBL;Acc:O82593]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.