Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra033300.1-P | Field mustard | nucleus | 64.24 | 59.48 |
CDX89993 | Canola | nucleus | 63.76 | 58.03 |
CDX89990 | Canola | nucleus | 52.71 | 56.57 |
CDY15225 | Canola | nucleus | 51.29 | 54.64 |
CDY32450 | Canola | nucleus | 22.59 | 42.86 |
CDY15220 | Canola | nucleus | 20.24 | 42.57 |
CDY55326 | Canola | nucleus | 24.0 | 42.15 |
CDY32449 | Canola | nucleus | 22.12 | 41.96 |
AT3G04420.1 | Thale cress | nucleus | 33.65 | 41.81 |
CDY15223 | Canola | nucleus | 20.47 | 41.04 |
AT1G02250.1 | Thale cress | nucleus | 34.59 | 40.61 |
CDX89995 | Canola | nucleus | 33.65 | 40.28 |
AT1G02220.1 | Thale cress | nucleus | 37.18 | 40.1 |
AT1G02230.1 | Thale cress | nucleus | 33.18 | 39.28 |
CDY55325 | Canola | nucleus | 23.29 | 38.98 |
CDY11741 | Canola | nucleus | 12.71 | 38.85 |
CDX89991 | Canola | nucleus | 24.24 | 38.29 |
CDX89994 | Canola | nucleus | 22.35 | 37.85 |
CDY15218 | Canola | nucleus | 31.29 | 36.44 |
CDX90132 | Canola | nucleus | 10.35 | 35.77 |
CDY15224 | Canola | cytosol | 27.53 | 31.28 |
CDY15214 | Canola | nucleus | 20.94 | 30.07 |
CDY15210 | Canola | cytosol, nucleus, plastid | 18.12 | 29.73 |
CDY59815 | Canola | cytosol | 16.71 | 26.59 |
CDY07138 | Canola | nucleus | 16.94 | 25.0 |
CDY07135 | Canola | nucleus | 20.24 | 23.18 |
CDY15215 | Canola | nucleus | 22.59 | 22.59 |
CDY59814 | Canola | cytosol | 22.35 | 22.35 |
KRH06324 | Soybean | cytosol | 13.88 | 22.1 |
CDX97252 | Canola | cytosol | 22.12 | 22.01 |
CDY59812 | Canola | cytosol | 21.88 | 20.62 |
CDY07136 | Canola | cytosol | 20.24 | 20.19 |
CDY15212 | Canola | nucleus | 20.0 | 20.0 |
CDX89999 | Canola | nucleus | 21.88 | 19.58 |
CDY01928 | Canola | cytosol, nucleus, vacuole | 21.41 | 18.72 |
Os06t0101800-01 | Rice | nucleus | 15.53 | 18.38 |
KRH47750 | Soybean | cytosol | 13.18 | 18.18 |
CDX89996 | Canola | nucleus | 10.59 | 17.44 |
KRH06327 | Soybean | cytosol | 16.24 | 17.25 |
KRH47748 | Soybean | cytosol | 16.24 | 17.04 |
KRH06326 | Soybean | nucleus | 17.18 | 16.94 |
CDY15217 | Canola | nucleus | 13.18 | 16.05 |
TraesCS7A01G000300.1 | Wheat | nucleus | 16.0 | 12.88 |
HORVU7Hr1G000910.1 | Barley | nucleus | 16.0 | 12.83 |
KRH47747 | Soybean | nucleus | 14.59 | 12.47 |
CDY07137 | Canola | extracellular, plasma membrane | 9.18 | 12.42 |
TraesCS4A01G499900.1 | Wheat | plastid | 16.47 | 12.15 |
EER87676 | Sorghum | plastid | 17.41 | 11.47 |
Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 16.47 | 11.46 |
TraesCS7D01G000200.1 | Wheat | plastid | 14.82 | 11.23 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FQ06 | UniProt:A0A078FQ06 | EnsemblPlants:CDY15221 | ProteinID:CDY15221 |
ProteinID:CDY15221.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085414001 | InterPro:IPR003441 |
InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
PANTHER:PTHR31989:SF58 | SUPFAM:SSF101941 | UniParc:UPI0004EF1414 | SEG:seg | : | : |
Description
BnaC05g01000DBnaC05g01000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ06]
Coordinates
chrLK032052:-:537788..539644
Molecular Weight (calculated)
48036.3 Da
IEP (calculated)
5.891
GRAVY (calculated)
-0.671
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDPVGYRFR PTDEEIVVHY VRPKNIESNT SHVDEVMNTV DIYSFDPWEL RFKSRIKSRD EVVWYFFGCK KRMRNNRQRR TIPSGFWSNT GETKPIIRKK
101: GGGGDHEKIG EKRVFSKSKS KSKSDWVMHE YVATFSSPDS QRMTTSTYTV CKVMFKGDPT DLPSSSSLIP QLNSNSSGGL STESEVQNPN QITSSITSSI
201: SSIPHVNNNN SGVLSTETEV DPRLFSGFLY LEEDAHFEDE TLRDLNSLPN NDDAEEEEWL VNLWSMQGDR NDHRPKMPLT GFISDDDDDD DSDSDSISTK
301: TVPPHKKLKV LFHMIWQCSI KSSSTCVTFG NSNRLIDQII DLPESPRSTI ESVSLTQEVS KALGANSAIS EKKMSPCDDD AQVSEIGGDQ MGQEMVIKNK
401: RAGFIYRMIQ KFAKKIKLCS CVSRI
101: GGGGDHEKIG EKRVFSKSKS KSKSDWVMHE YVATFSSPDS QRMTTSTYTV CKVMFKGDPT DLPSSSSLIP QLNSNSSGGL STESEVQNPN QITSSITSSI
201: SSIPHVNNNN SGVLSTETEV DPRLFSGFLY LEEDAHFEDE TLRDLNSLPN NDDAEEEEWL VNLWSMQGDR NDHRPKMPLT GFISDDDDDD DSDSDSISTK
301: TVPPHKKLKV LFHMIWQCSI KSSSTCVTFG NSNRLIDQII DLPESPRSTI ESVSLTQEVS KALGANSAIS EKKMSPCDDD AQVSEIGGDQ MGQEMVIKNK
401: RAGFIYRMIQ KFAKKIKLCS CVSRI
001: METPVGLRFC PTDEEIVVDY LWPKNSDRDT SHVDRFINTV PVCRLDPWEL PCQSRIKLKD VAWCFFRPKE NKYGRGDQQM RKTKSGFWKS TGRPKPIMRN
101: RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ
201: EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
301: GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT
101: RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ
201: EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
301: GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT
Arabidopsis Description
NAC003NAC domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP28]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.