Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • peroxisome 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033300.1-P Field mustard nucleus 64.24 59.48
CDX89993 Canola nucleus 63.76 58.03
CDX89990 Canola nucleus 52.71 56.57
CDY15225 Canola nucleus 51.29 54.64
CDY32450 Canola nucleus 22.59 42.86
CDY15220 Canola nucleus 20.24 42.57
CDY55326 Canola nucleus 24.0 42.15
CDY32449 Canola nucleus 22.12 41.96
AT3G04420.1 Thale cress nucleus 33.65 41.81
CDY15223 Canola nucleus 20.47 41.04
AT1G02250.1 Thale cress nucleus 34.59 40.61
CDX89995 Canola nucleus 33.65 40.28
AT1G02220.1 Thale cress nucleus 37.18 40.1
AT1G02230.1 Thale cress nucleus 33.18 39.28
CDY55325 Canola nucleus 23.29 38.98
CDY11741 Canola nucleus 12.71 38.85
CDX89991 Canola nucleus 24.24 38.29
CDX89994 Canola nucleus 22.35 37.85
CDY15218 Canola nucleus 31.29 36.44
CDX90132 Canola nucleus 10.35 35.77
CDY15224 Canola cytosol 27.53 31.28
CDY15214 Canola nucleus 20.94 30.07
CDY15210 Canola cytosol, nucleus, plastid 18.12 29.73
CDY59815 Canola cytosol 16.71 26.59
CDY07138 Canola nucleus 16.94 25.0
CDY07135 Canola nucleus 20.24 23.18
CDY15215 Canola nucleus 22.59 22.59
CDY59814 Canola cytosol 22.35 22.35
KRH06324 Soybean cytosol 13.88 22.1
CDX97252 Canola cytosol 22.12 22.01
CDY59812 Canola cytosol 21.88 20.62
CDY07136 Canola cytosol 20.24 20.19
CDY15212 Canola nucleus 20.0 20.0
CDX89999 Canola nucleus 21.88 19.58
CDY01928 Canola cytosol, nucleus, vacuole 21.41 18.72
Os06t0101800-01 Rice nucleus 15.53 18.38
KRH47750 Soybean cytosol 13.18 18.18
CDX89996 Canola nucleus 10.59 17.44
KRH06327 Soybean cytosol 16.24 17.25
KRH47748 Soybean cytosol 16.24 17.04
KRH06326 Soybean nucleus 17.18 16.94
CDY15217 Canola nucleus 13.18 16.05
TraesCS7A01G000300.1 Wheat nucleus 16.0 12.88
HORVU7Hr1G000910.1 Barley nucleus 16.0 12.83
KRH47747 Soybean nucleus 14.59 12.47
CDY07137 Canola extracellular, plasma membrane 9.18 12.42
TraesCS4A01G499900.1 Wheat plastid 16.47 12.15
EER87676 Sorghum plastid 17.41 11.47
Zm00001d045617_P001 Maize nucleus, plasma membrane, vacuole 16.47 11.46
TraesCS7D01G000200.1 Wheat plastid 14.82 11.23
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078FQ06UniProt:A0A078FQ06EnsemblPlants:CDY15221ProteinID:CDY15221
ProteinID:CDY15221.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00085414001InterPro:IPR003441
InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR31989
PANTHER:PTHR31989:SF58SUPFAM:SSF101941UniParc:UPI0004EF1414SEG:seg::
Description
BnaC05g01000DBnaC05g01000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ06]
Coordinates
chrLK032052:-:537788..539644
Molecular Weight (calculated)
48036.3 Da
IEP (calculated)
5.891
GRAVY (calculated)
-0.671
Length
425 amino acids
Sequence
(BLAST)
001: MVDPVGYRFR PTDEEIVVHY VRPKNIESNT SHVDEVMNTV DIYSFDPWEL RFKSRIKSRD EVVWYFFGCK KRMRNNRQRR TIPSGFWSNT GETKPIIRKK
101: GGGGDHEKIG EKRVFSKSKS KSKSDWVMHE YVATFSSPDS QRMTTSTYTV CKVMFKGDPT DLPSSSSLIP QLNSNSSGGL STESEVQNPN QITSSITSSI
201: SSIPHVNNNN SGVLSTETEV DPRLFSGFLY LEEDAHFEDE TLRDLNSLPN NDDAEEEEWL VNLWSMQGDR NDHRPKMPLT GFISDDDDDD DSDSDSISTK
301: TVPPHKKLKV LFHMIWQCSI KSSSTCVTFG NSNRLIDQII DLPESPRSTI ESVSLTQEVS KALGANSAIS EKKMSPCDDD AQVSEIGGDQ MGQEMVIKNK
401: RAGFIYRMIQ KFAKKIKLCS CVSRI
Best Arabidopsis Sequence Match ( AT1G02220.1 )
(BLAST)
001: METPVGLRFC PTDEEIVVDY LWPKNSDRDT SHVDRFINTV PVCRLDPWEL PCQSRIKLKD VAWCFFRPKE NKYGRGDQQM RKTKSGFWKS TGRPKPIMRN
101: RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ
201: EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
301: GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT
Arabidopsis Description
NAC003NAC domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP28]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.