Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15220 | Canola | nucleus | 28.13 | 50.0 |
| AT1G02250.1 | Thale cress | nucleus | 49.58 | 49.17 |
| CDX89994 | Canola | nucleus | 33.15 | 47.41 |
| CDY15223 | Canola | nucleus | 27.86 | 47.17 |
| CDY55326 | Canola | nucleus | 31.75 | 47.11 |
| Bra033299.1-P | Field mustard | nucleus | 32.59 | 46.61 |
| AT3G04420.1 | Thale cress | nucleus | 44.29 | 46.49 |
| AT1G02210.1 | Thale cress | cytosol, nucleus, plastid | 11.14 | 45.98 |
| CDY55325 | Canola | nucleus | 30.36 | 42.91 |
| CDY32449 | Canola | nucleus | 26.74 | 42.86 |
| Bra033302.1-P | Field mustard | nucleus | 30.92 | 42.69 |
| Bra032615.1-P | Field mustard | nucleus | 26.46 | 42.41 |
| CDX89995 | Canola | nucleus | 41.5 | 41.97 |
| CDY32450 | Canola | nucleus | 25.91 | 41.52 |
| Bra033298.1-P | Field mustard | nucleus | 42.9 | 41.18 |
| CDY11741 | Canola | nucleus | 15.88 | 41.01 |
| Bra033308.1-P | Field mustard | nucleus | 44.57 | 40.4 |
| CDX89990 | Canola | nucleus | 44.57 | 40.4 |
| AT1G02220.1 | Thale cress | nucleus | 44.29 | 40.36 |
| CDX89991 | Canola | nucleus | 30.08 | 40.15 |
| Bra033303.1-P | Field mustard | nucleus | 42.34 | 39.58 |
| Bra033305.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 30.08 | 38.3 |
| CDX90132 | Canola | nucleus | 13.09 | 38.21 |
| Bra010895.1-P | Field mustard | nucleus | 13.09 | 38.21 |
| CDY15225 | Canola | nucleus | 40.95 | 36.84 |
| CDY15218 | Canola | nucleus | 37.05 | 36.44 |
| CDX89993 | Canola | nucleus | 44.01 | 33.83 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 39.28 | 33.18 |
| Bra033300.1-P | Field mustard | nucleus | 42.06 | 32.9 |
| Bra033306.1-P | Field mustard | nucleus | 31.2 | 29.17 |
| CDY15224 | Canola | cytosol | 30.08 | 28.88 |
| KRH06324 | Soybean | cytosol | 21.17 | 28.46 |
| AT1G01010.1 | Thale cress | nucleus | 31.75 | 26.57 |
| AT3G04430.1 | Thale cress | nucleus | 14.48 | 26.26 |
| AT4G01520.1 | Thale cress | nucleus | 21.45 | 25.5 |
| KRH47750 | Soybean | cytosol | 21.45 | 25.0 |
| AT4G01550.1 | Thale cress | cytosol, golgi, nucleus | 29.8 | 23.41 |
| Os06t0101800-01 | Rice | nucleus | 22.84 | 22.84 |
| AT4G01540.1 | Thale cress | cytosol | 27.86 | 21.14 |
| KRH06327 | Soybean | cytosol | 23.12 | 20.75 |
| KRH47748 | Soybean | cytosol | 22.84 | 20.25 |
| KRH06326 | Soybean | nucleus | 22.56 | 18.79 |
| KRH47747 | Soybean | nucleus | 22.01 | 15.9 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 21.73 | 14.72 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 21.45 | 14.58 |
| TraesCS4A01G499900.1 | Wheat | plastid | 23.12 | 14.41 |
| TraesCS7D01G000200.1 | Wheat | plastid | 21.73 | 13.9 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 21.17 | 12.44 |
| EER87676 | Sorghum | plastid | 22.01 | 12.25 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:837630 | UniProt:A0A178WK80 | ProteinID:AAC24383.1 | EMBL:AB493424 |
| ProteinID:AEE27405.1 | Symbol:ANAC004 | ArrayExpress:AT1G02230 | EnsemblPlantsGene:AT1G02230 | RefSeq:AT1G02230 | TAIR:AT1G02230 |
| RefSeq:AT1G02230-TAIR-G | EnsemblPlants:AT1G02230.1 | TAIR:AT1G02230.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_171726.2 |
| UniProt:O81913 | ProteinID:OAP18730.1 | PFAM:PF02365 | PO:PO:0000293 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF58 | SUPFAM:SSF101941 | UniParc:UPI00005B0CE9 | SEG:seg | : | : |
Description
NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
Coordinates
chr1:-:434965..436922
Molecular Weight (calculated)
40898.6 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.795
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.