Factsheet for Bra033298.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15218	Canola	nucleus	80.21	82.19
Bra033302.1-P	Field mustard	nucleus	38.24	55.0
Bra032615.1-P	Field mustard	nucleus	30.75	51.34
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	36.63	48.58
Bra033299.1-P	Field mustard	nucleus	32.35	48.21
Bra010895.1-P	Field mustard	nucleus	14.97	45.53
Bra033303.1-P	Field mustard	nucleus	44.12	42.97
AT1G02230.1	Thale cress	nucleus	41.18	42.9
AT1G02250.1	Thale cress	nucleus	41.18	42.54
Bra033308.1-P	Field mustard	nucleus	41.98	39.65
AT3G04420.1	Thale cress	nucleus	32.62	35.67
Bra033300.1-P	Field mustard	nucleus	43.05	35.08
AT1G02220.1	Thale cress	nucleus	35.29	33.5
Bra033306.1-P	Field mustard	nucleus	32.62	31.77
Bra027596.1-P	Field mustard	nucleus	19.79	30.58
Bra036328.1-P	Field mustard	nucleus	22.19	28.82
KRH06324	Soybean	cytosol	17.38	24.34
Bra036326.1-P	Field mustard	nucleus	23.8	24.05
Bra033297.1-P	Field mustard	nucleus	13.37	22.22
Bra036327.1-P	Field mustard	cytosol	25.13	22.12
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	25.94	21.9
KRH47750	Soybean	cytosol	16.84	20.45
Os06t0101800-01	Rice	nucleus	19.25	20.06
Bra033296.1-P	Field mustard	nucleus	23.26	18.32
KRH47748	Soybean	cytosol	18.98	17.53
KRH06326	Soybean	nucleus	18.98	16.47
KRH06327	Soybean	cytosol	17.38	16.25
KRH47747	Soybean	nucleus	20.05	15.09
TraesCS7A01G000300.1	Wheat	nucleus	18.72	13.26
TraesCS7D01G000200.1	Wheat	plastid	19.79	13.19
HORVU7Hr1G000910.1	Barley	nucleus	18.45	13.02
TraesCS4A01G499900.1	Wheat	plastid	19.25	12.5
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	20.32	12.44
EER87676	Sorghum	plastid	18.45	10.7

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033298	EnsemblPlants:Bra033298.1	EnsemblPlants:Bra033298.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWW3	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF58	SUPFAM:SSF101941
UniParc:UPI0002544F77	SEG:seg	:	:	:	:

Description

AT1G02230 (E=1e-078) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4403396..4404938

Molecular Weight (calculated)

43048.2 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.866

Length

374 amino acids

Sequence
(BLAST)

001: MENRVGFRFI PTDEEIVDYY LRLKNLGGDT SHVDKAISTV DICSFEPWEL PSKSRRESRD QIWYFFGRKD NKYNRGERQS RKTRSGFWKK TGVTTEIIRK
101: RGNREKIGEK RVLVFHSKPE WVMHEYVSTF LTPTQTTYTV CKIIFKDDPR DLSSSSSSAP GGGGEVEHNH SQFTHMNNSG EFEGLQNQRH FTGLLDAEKE
201: TQIHDALCRG LDNVSTHDLN SFINCGNNDE EEHGNLLFMQ ENRNDYRPKM SLTGFIDHSD DEDSDSDLIS ATTTISLILL CFGSSNRRID QITDLQNSPN
301: STTKLMSPTQ VVRKTSLDAS KEKYDVQGNE MGENYKMDQE VINKKRGSFF YRKIRSCIKK TLLCSSIPTQ EHDN

Best Arabidopsis Sequence Match ( AT1G02250.1 )
(BLAST)

001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT

Arabidopsis Description

NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.