Factsheet for Bra033306.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15224	Canola	cytosol	54.17	55.62
Bra010895.1-P	Field mustard	nucleus	15.1	47.15
Bra033302.1-P	Field mustard	nucleus	31.25	46.15
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	32.03	43.62
Bra033299.1-P	Field mustard	nucleus	25.26	38.65
Bra032615.1-P	Field mustard	nucleus	22.4	38.39
Bra033298.1-P	Field mustard	nucleus	31.77	32.62
AT1G02250.1	Thale cress	nucleus	30.47	32.32
Bra033308.1-P	Field mustard	nucleus	32.81	31.82
Bra027596.1-P	Field mustard	nucleus	19.79	31.41
Bra033303.1-P	Field mustard	nucleus	31.25	31.25
AT1G02230.1	Thale cress	nucleus	29.17	31.2
AT3G04420.1	Thale cress	nucleus	25.52	28.66
Bra033300.1-P	Field mustard	nucleus	32.29	27.02
KRH06324	Soybean	cytosol	16.15	23.22
AT1G02220.1	Thale cress	nucleus	23.7	23.1
Bra036328.1-P	Field mustard	nucleus	17.19	22.92
KRH47750	Soybean	cytosol	16.15	20.13
Bra036326.1-P	Field mustard	nucleus	18.75	19.46
Bra033297.1-P	Field mustard	nucleus	10.68	18.22
Os06t0101800-01	Rice	nucleus	16.93	18.11
Bra033296.1-P	Field mustard	nucleus	22.14	17.89
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.01	16.48
Bra036327.1-P	Field mustard	cytosol	17.71	16.0
KRH06327	Soybean	cytosol	15.89	15.25
KRH47748	Soybean	cytosol	15.89	15.06
KRH06326	Soybean	nucleus	16.15	14.39
TraesCS7D01G000200.1	Wheat	plastid	20.83	14.26
TraesCS4A01G499900.1	Wheat	plastid	21.35	14.24
TraesCS7A01G000300.1	Wheat	nucleus	19.53	14.2
KRH47747	Soybean	nucleus	17.97	13.88
HORVU7Hr1G000910.1	Barley	nucleus	18.75	13.58
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	20.31	12.77
EER87676	Sorghum	plastid	18.23	10.85

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033306	EnsemblPlants:Bra033306.1	EnsemblPlants:Bra033306.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWX1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PRINTS:PR01228	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF58
SUPFAM:SSF101941	UniParc:UPI0002544F6F	SEG:seg	:	:	:

Description

AT1G02230 (E=2e-046) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4356511..4358094

Molecular Weight (calculated)

38743.9 Da

IEP (calculated)

4.463

GRAVY (calculated)

-0.749

Length

384 amino acids

Sequence
(BLAST)

001: MVDPHPVGFR FRPTDEEIFN PYLKSKNMDG NTSHVDEVIS TVDIYSFDPL ELASQSTSTR KETDNVLYFF CPKDNRYNRG ERQSRKTKSG SWKKTGVTTN
101: IMRKRGDCEK IGEKRVFVFQ YSKILGGSKP KSDWVMHEYV ATFVFPAQTP MVTYALCKVM FKGDASDLPS SSAAAPAGGG GSGGSGGGGC KGGGGSGGGG
201: GGCDGSSGSG GGGCDVRGGD GDGGGDRGGG GCDGGGGSGG GCDGGGDGDG DGGYDGGGGG GDGGCDGGGG SGGGDGGYDG GGGGGDGGCD GGGGSGVGGG
301: EVEHTHSLIT PTNNRGGGMS AEAETERSSS ELHNLRQFSG FLHLEEETQM EDAIRRAINN LSPHDLNCLL NNDYDDEEQG NTQE

Best Arabidopsis Sequence Match ( AT3G04420.1 )
(BLAST)

001: MENPVGLRFR PTDKEIVVDY LRPKNSDRDT SHVDRVISTV TIRSFDPWEL PCQSRIKLKD ESWCFFSPKE NKYGRGDQQI RKTKSGYWKI TGKPKPILRN
101: RQEIGEKKVL MFYMSKELGG SKSDWVMHEY HAFSPTQMMM TYTICKVMFK GDVREISSSS ASYGSEIEQS RDSLIPLLVN DSEEEAQIED AIPIEEWETW
201: LTDDGVDEQV NHIMNMKDDR NNHRPQKPLT GVLIDDSSDD DDDSDLLSPT TNSIENSSTC DSFGSSDQIN LVSLTQEVSQ ALITSIDTPE KIKSPYDDAQ
301: GTGAGGQKLG QETREKKRAG FFHRMIQIFV KKIHQCSSIS RT

Arabidopsis Description

anac048At3g04420/T27C4_6 [Source:UniProtKB/TrEMBL;Acc:Q8W4R4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.