Factsheet for Bra033305.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033302.1-P	Field mustard	nucleus	83.69	90.77
CDX89991	Canola	nucleus	72.34	75.84
CDY15223	Canola	nucleus	51.42	68.4
Bra033299.1-P	Field mustard	nucleus	36.52	41.04
Bra032615.1-P	Field mustard	nucleus	32.27	40.62
Bra010895.1-P	Field mustard	nucleus	17.38	39.84
Bra033298.1-P	Field mustard	nucleus	48.58	36.63
AT1G02250.1	Thale cress	nucleus	41.84	32.6
Bra033306.1-P	Field mustard	nucleus	43.62	32.03
Bra033303.1-P	Field mustard	nucleus	42.2	30.99
Bra033308.1-P	Field mustard	nucleus	42.55	30.3
AT1G02230.1	Thale cress	nucleus	38.3	30.08
Bra027596.1-P	Field mustard	nucleus	22.34	26.03
AT3G04420.1	Thale cress	nucleus	31.21	25.73
Bra033300.1-P	Field mustard	nucleus	39.01	23.97
Bra036328.1-P	Field mustard	nucleus	23.05	22.57
KRH06324	Soybean	cytosol	21.28	22.47
AT1G02220.1	Thale cress	nucleus	30.5	21.83
Bra036326.1-P	Field mustard	nucleus	25.18	19.19
Bra033297.1-P	Field mustard	nucleus	14.89	18.67
KRH47750	Soybean	cytosol	19.5	17.86
Bra036327.1-P	Field mustard	cytosol	25.53	16.94
Bra033296.1-P	Field mustard	nucleus	26.95	16.0
KRH06327	Soybean	cytosol	21.99	15.5
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	23.76	15.12
KRH47748	Soybean	cytosol	20.92	14.57
Os06t0101800-01	Rice	nucleus	18.44	14.48
KRH06326	Soybean	nucleus	21.99	14.39
KRH47747	Soybean	nucleus	20.92	11.87
TraesCS7A01G000300.1	Wheat	nucleus	21.63	11.55
TraesCS7D01G000200.1	Wheat	plastid	22.7	11.41
HORVU7Hr1G000910.1	Barley	nucleus	20.92	11.13
TraesCS4A01G499900.1	Wheat	plastid	22.34	10.94
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	20.57	9.49
EER87676	Sorghum	plastid	20.57	8.99

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033305	EnsemblPlants:Bra033305.1	EnsemblPlants:Bra033305.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWX0	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF57	SUPFAM:SSF101941
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002544F70	SEG:seg	:	:

Description

AT1G02230 (E=3e-048) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4367147..4368347

Molecular Weight (calculated)

31186.1 Da

IEP (calculated)

5.039

GRAVY (calculated)

-0.756

Length

282 amino acids

Sequence
(BLAST)

001: MTAHSVRQPN LLAVLISLGL TLFHFVALTV NTTDQEIVNY YIRLKNLGGS DTNYVDKAIR AVDICSFDPW ELPSKSRRES RDQVWYFFCR KDNRGERQSR
101: KTKSGFWKKT GPTMDIFQKR GDREKIGEKR VLVFHLSGSK SKSDWVMHEY VATFLPPTDQ MTYTLCKLKF KGDASDLPSS SSGGDGGGGD GGCGDDGGGG
201: GCDGGGGDGC DGGGGGGGID EHNQYLITHM NNSGGYEDPS QFNVSTDDFN CFLNYNDDEE EQEQGNTMFM QYDRNTYRPN CP

Best Arabidopsis Sequence Match ( AT1G02230.1 )
(BLAST)

001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT

Arabidopsis Description

NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.