Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra018296.1-P | |
| Bra033467.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04430.1 | Bra018296.1-P | AT3G51920.1 | 17360592 |
| AT3G04430.1 | Bra033467.1-P | AT3G51920.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G04430.1 | Thale cress | nucleus | 56.89 | 64.65 |
| CDX89996 | Canola | nucleus | 63.11 | 55.04 |
| CDY15217 | Canola | nucleus | 74.67 | 48.14 |
| Bra027596.1-P | Field mustard | nucleus | 23.11 | 21.49 |
| Bra033299.1-P | Field mustard | nucleus | 23.56 | 21.12 |
| Bra032615.1-P | Field mustard | nucleus | 20.44 | 20.54 |
| Bra036328.1-P | Field mustard | nucleus | 26.22 | 20.49 |
| KRH06324 | Soybean | cytosol | 23.56 | 19.85 |
| Bra010895.1-P | Field mustard | nucleus | 9.78 | 17.89 |
| Bra033302.1-P | Field mustard | nucleus | 19.11 | 16.54 |
| Bra036326.1-P | Field mustard | nucleus | 27.11 | 16.49 |
| KRH47750 | Soybean | cytosol | 21.33 | 15.58 |
| Bra033305.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 18.67 | 14.89 |
| Bra036327.1-P | Field mustard | cytosol | 27.11 | 14.35 |
| Bra008553.1-P | Field mustard | cytosol, nucleus, plasma membrane | 28.0 | 14.22 |
| Os06t0101800-01 | Rice | nucleus | 21.33 | 13.37 |
| Bra033298.1-P | Field mustard | nucleus | 22.22 | 13.37 |
| KRH06327 | Soybean | cytosol | 23.56 | 13.25 |
| Bra033308.1-P | Field mustard | nucleus | 21.78 | 12.37 |
| Bra033296.1-P | Field mustard | nucleus | 25.78 | 12.21 |
| KRH47748 | Soybean | cytosol | 21.78 | 12.1 |
| KRH06326 | Soybean | nucleus | 23.11 | 12.06 |
| Bra033303.1-P | Field mustard | nucleus | 20.0 | 11.72 |
| KRH47747 | Soybean | nucleus | 24.44 | 11.07 |
| Bra033306.1-P | Field mustard | nucleus | 18.22 | 10.68 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 23.11 | 9.81 |
| Bra033300.1-P | Field mustard | nucleus | 20.0 | 9.8 |
| TraesCS4A01G499900.1 | Wheat | plastid | 23.56 | 9.2 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 21.33 | 9.09 |
| TraesCS7D01G000200.1 | Wheat | plastid | 21.33 | 8.56 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 22.67 | 8.35 |
| EER87676 | Sorghum | plastid | 23.56 | 8.22 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EnsemblPlantsGene:Bra033297 | EnsemblPlants:Bra033297.1 | EnsemblPlants:Bra033297.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M4EWW2 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF7 | SUPFAM:SSF101941 |
| UniParc:UPI0002544F78 | : | : | : | : | : |
Description
AT3G04430 (E=4e-076) anac049 | anac049 (Arabidopsis NAC domain containing protein 49); transcription factor
Coordinates
chrA10:-:4409464..4411105
Molecular Weight (calculated)
26474.8 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.884
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRYTFNPPE DELINYYLNN KITENDDPEG KQINEVNICH HEPADLPGLA KIESGHTWYF ISPVEKFGKL NRRKRASKTG HWKITGNSCT IKDTDGNPIG
101: LKKFLVFQEN KNRRSSTLLP TTVQQHKFTW IIHEFHSFLH HPNKMLTHHK DPVEDYGGDY CNDLEELTPE LDSSRWLDHS YQFDSNHWGS FADTTHVRTK
201: FYLITDNSST ANQRSHELAW YFMIY
101: LKKFLVFQEN KNRRSSTLLP TTVQQHKFTW IIHEFHSFLH HPNKMLTHHK DPVEDYGGDY CNDLEELTPE LDSSRWLDHS YQFDSNHWGS FADTTHVRTK
201: FYLITDNSST ANQRSHELAW YFMIY
001: MYRCTFNPPE EELINYYLNN KITENDDLVG KQIAEVNILH HEPADLPGLA KIESSHTWYF ISPVEKFGKL NRTKRVSRSG HWKITGNSRT IKDVDGNPIG
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
Arabidopsis Description
anac049NAC domain containing protein 49 [Source:UniProtKB/TrEMBL;Acc:Q9M844]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.