Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra018296.1-P | Field mustard | cytosol | 75.0 | 100.0 |
CDX95314 | Canola | cytosol | 95.45 | 83.44 |
CDY23174 | Canola | cytosol | 95.45 | 83.44 |
AT3G51920.1 | Thale cress | cytosol | 87.88 | 76.82 |
Protein Annotations
EnsemblPlants:Bra033467.1 | EnsemblPlants:Bra033467.1-P | EnsemblPlantsGene:Bra033467 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
PANTHER:PTHR23050:SF211 | PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 |
SUPFAM:SSF47473 | UniParc:UPI0002543866 | UniProt:M4EXD0 | MapMan:35.1 | : | : |
Description
AT3G51920 (E=5e-062) CAM9, CML9, ATCML9 | CAM9 (CALMODULIN 9); calcium ion binding
Coordinates
chrA04:+:4376720..4377394
Molecular Weight (calculated)
14662.6 Da
IEP (calculated)
4.133
GRAVY (calculated)
-0.167
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MVACNTGFIT KEKLTKVMKS MGKSPNEEQL QEMMSHVDIF GNGGITFDDF LYIMAQNTSQ EAASDELIEV FRVFDRDGDG VISALELGEG MKDMGMKITV
101: EEAEHMVREA DLDGDGVLSF HEFSKMMIAA SY
101: EEAEHMVREA DLDGDGVLSF HEFSKMMIAA SY
001: MADAFTDEQI QEFYEAFCLI DKDSDGFITK EKLTKVMKSM GKNPKAEQLQ QMMSDVDIFG NGGITFDDFL YIMAQNTSQE SASDELIEVF RVFDRDGDGL
101: ISQLELGEGM KDMGMKITAE EAEHMVREAD LDGDGFLSFH EFSKMMIAAS Y
101: ISQLELGEGM KDMGMKITAE EAEHMVREAD LDGDGFLSFH EFSKMMIAAS Y
Arabidopsis Description
CML9Calmodulin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9S744]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.