Factsheet for Bra028581.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018126.1-P
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10520.1	Bra000214.1-P	AT2G41090.1	17360592
AT5G10520.1	Bra000214.1-P	AT2G41100.1	17360592
AT5G10520.1	Bra018126.1-P	AT3G47620.1	21798944
AT5G10520.1	Bra018296.1-P	AT3G51920.1	17360592
AT5G10520.1	Bra033467.1-P	AT3G51920.1	17360592
AT5G10520.1	Bra039723.1-P	AT4G14640.1	17360592
AT5G10520.1	Bra002368.1-P	AT5G21274.1	17360592
AT5G10520.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85756	Canola	cytosol	94.96	77.89
CDY40103	Canola	cytosol	90.93	75.37
AT5G10520.1	Thale cress	cytosol	78.09	66.38
Bra009025.1-P	Field mustard	cytosol	79.09	65.55
Bra031854.1-P	Field mustard	cytosol	69.02	58.67
Bra024395.1-P	Field mustard	cytosol	66.5	58.54
VIT_00s1291g00030.t01	Wine grape	cytosol	34.01	47.54
KRH74475	Soybean	cytosol	36.78	46.95
Solyc04g014410.2.1	Tomato	cytosol, mitochondrion	37.53	46.71
Zm00001d047798_P001	Maize	cytosol	16.37	46.1
Zm00001d018955_P001	Maize	cytosol	18.39	45.34
VIT_00s0768g00040.t01	Wine grape	cytosol	27.46	44.31
PGSC0003DMT400041603	Potato	cytosol	54.41	43.03
VIT_00s0929g00020.t01	Wine grape	cytosol	52.64	43.0
Solyc11g010730.1.1	Tomato	cytosol	54.41	42.86
KRH39471	Soybean	cytosol	48.36	42.38
KRH45545	Soybean	cytosol	50.88	42.35
PGSC0003DMT400060605	Potato	cytosol	50.38	42.19
KRG99478	Soybean	cytosol	50.38	41.32
Bra035366.1-P	Field mustard	cytosol	41.06	40.25
Bra035523.1-P	Field mustard	cytosol	40.3	38.46
GSMUA_Achr2P02460_001	Banana	cytosol	50.13	37.98
Bra001138.1-P	Field mustard	cytosol	35.26	37.43
Bra038555.1-P	Field mustard	mitochondrion	33.5	35.19
TraesCS7D01G471700.1	Wheat	cytosol	47.61	35.06
TraesCS7A01G484300.1	Wheat	cytosol	47.36	34.94
Os06t0663900-03	Rice	cytosol	47.86	34.23
Bra038828.1-P	Field mustard	mitochondrion	33.25	34.11
Zm00001d046941_P001	Maize	cytosol	48.36	33.68
KXG20550	Sorghum	cytosol	48.36	33.45
TraesCS7B01G388000.3	Wheat	mitochondrion	47.86	32.76
HORVU7Hr1G109290.2	Barley	cytosol	47.1	32.58
Bra039458.1-P	Field mustard	cytosol	40.55	32.2
Bra023698.1-P	Field mustard	cytosol, plastid	39.04	31.44
Bra006483.1-P	Field mustard	cytosol, plastid	35.77	28.23
Bra002708.1-P	Field mustard	nucleus	36.52	25.04
Zm00001d040679_P001	Maize	plastid	20.91	23.25
Bra037291.1-P	Field mustard	mitochondrion, plastid	27.2	21.01
Bra004167.1-P	Field mustard	cytosol, plastid	25.19	20.16
Bra028150.1-P	Field mustard	cytosol	26.45	19.63
Bra001996.1-P	Field mustard	cytosol	29.72	18.55
Bra016415.1-P	Field mustard	cytosol	30.48	17.04
Bra024249.1-P	Field mustard	cytosol	28.97	16.96
Bra008299.1-P	Field mustard	cytosol	28.97	16.48
Bra031943.1-P	Field mustard	cytosol	28.21	16.33
Bra017931.1-P	Field mustard	cytosol	29.72	15.8
Bra011579.1-P	Field mustard	nucleus	15.11	15.75
Bra015680.1-P	Field mustard	cytosol	27.46	15.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:27.4.7	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra028581	EnsemblPlants:Bra028581.1	EnsemblPlants:Bra028581.1-P
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4EIG6	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF105	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00025434E4	SEG:seg	:	:	:	:

Description

AT5G10520 (E=1e-145) RBK1 | RBK1 (Rop Binding protein Kinases 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA02:+:1149922..1151365

Molecular Weight (calculated)

44232.3 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.350

Length

397 amino acids

Sequence
(BLAST)

001: MAVEEGKLVT ETETNRESKE HQEEIELHRN DLGLEDSSSS SSSSPRGVLG ITAMASDTDN NNSSSYSSCS SFSSDDKSSS TSTSPVSNIP NKNVSSSSHS
101: LQWTKMIESI KKKSIRRFTV IPFLASYQLT RKNLRRKQPI LSPSENSFFM AKPSWRNFTY EELAAATEDF NPENMIGKGG HAEVYKGVLP DGETIAIKKV
201: MSHNKKEEER VSDFLSELGI IAHVNHTNAA KLLGFSIDRG LHFVLEYSPH GSLATMLFGT KKCLEWKIRY KVALGIADGL SYLHNDCPRR IIHRDIKASN
301: ILLSRDYDAQ ISDFGLAKWL PENWSHHVVS PIEGTFGYMA PEYFIHGIVD EKIDVFAFGV LLLEIITGRR AVDTASRQSI VAWVILIPLI NPDQGSS

Best Arabidopsis Sequence Match ( AT5G10520.2 )
(BLAST)

001: MAVEDNKNSE SKNHQEVELH RNDLGLEDSS SPRGVLGMVS DSDNSSSSCS SCSSDDKSSS TSSPFSNTTK TVSSSHHGLQ WNKMIESIKK KSMRRFSVIP
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWVNAS VTLY

Arabidopsis Description

RBK1RBK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.