Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1291g00030.t01 | Wine grape | cytosol | 38.93 | 71.83 |
| KRH74475 | Soybean | cytosol | 39.31 | 66.24 |
| Solyc04g014410.2.1 | Tomato | cytosol, mitochondrion | 38.36 | 63.01 |
| VIT_00s0929g00020.t01 | Wine grape | cytosol | 54.39 | 58.64 |
| Zm00001d047798_P001 | Maize | cytosol | 15.65 | 58.16 |
| KRH39471 | Soybean | cytosol | 46.76 | 54.08 |
| CDY08783 | Canola | cytosol | 46.76 | 53.73 |
| Bra024395.1-P | Field mustard | cytosol | 46.18 | 53.66 |
| AT5G65530.1 | Thale cress | cytosol | 46.56 | 53.51 |
| KRH45545 | Soybean | cytosol | 48.47 | 53.25 |
| CDY14578 | Canola | cytosol | 45.61 | 53.11 |
| PGSC0003DMT400060605 | Potato | cytosol | 47.71 | 52.74 |
| TraesCS7D01G471700.1 | Wheat | cytosol | 53.82 | 52.32 |
| TraesCS7A01G484300.1 | Wheat | cytosol | 53.63 | 52.23 |
| KRG99478 | Soybean | cytosol | 48.09 | 52.07 |
| Bra031854.1-P | Field mustard | cytosol | 46.37 | 52.03 |
| Os06t0663900-03 | Rice | cytosol | 54.96 | 51.89 |
| AT5G10520.1 | Thale cress | cytosol | 46.18 | 51.82 |
| CDY37833 | Canola | cytosol | 46.18 | 51.82 |
| Solyc11g010730.1.1 | Tomato | cytosol | 49.62 | 51.59 |
| VIT_00s0768g00040.t01 | Wine grape | cytosol | 24.05 | 51.22 |
| Zm00001d018955_P001 | Maize | cytosol | 15.65 | 50.93 |
| PGSC0003DMT400041603 | Potato | cytosol | 48.66 | 50.8 |
| Zm00001d046941_P001 | Maize | cytosol | 54.96 | 50.53 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 37.4 | 50.39 |
| KXG20550 | Sorghum | cytosol | 55.15 | 50.35 |
| Bra028581.1-P | Field mustard | cytosol | 37.98 | 50.13 |
| CDX85756 | Canola | cytosol | 45.99 | 49.79 |
| CDY40103 | Canola | cytosol | 45.42 | 49.69 |
| Bra009025.1-P | Field mustard | cytosol | 45.23 | 49.48 |
| CDX69825 | Canola | cytosol | 45.23 | 49.48 |
| HORVU7Hr1G109290.2 | Barley | cytosol | 54.01 | 49.3 |
| CDY71497 | Canola | cytosol | 30.15 | 48.92 |
| CDY33949 | Canola | cytosol | 46.37 | 48.89 |
| TraesCS7B01G388000.3 | Wheat | mitochondrion | 53.44 | 48.28 |
| CDX97023 | Canola | cytosol | 45.23 | 48.27 |
| GSMUA_Achr1P25900_001 | Banana | cytosol | 37.98 | 46.93 |
| GSMUA_Achr5P24180_001 | Banana | mitochondrion | 32.82 | 46.61 |
| GSMUA_Achr10P... | Banana | mitochondrion | 34.16 | 45.66 |
| GSMUA_Achr5P21870_001 | Banana | mitochondrion | 33.78 | 43.6 |
| GSMUA_Achr4P02180_001 | Banana | plastid | 31.49 | 39.95 |
| GSMUA_Achr6P03860_001 | Banana | cytosol | 33.21 | 39.19 |
| GSMUA_Achr9P19620_001 | Banana | cytosol | 37.6 | 30.64 |
| Zm00001d040679_P001 | Maize | plastid | 20.8 | 30.53 |
| GSMUA_Achr2P04970_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 35.5 | 29.76 |
| GSMUA_Achr2P22530_001 | Banana | plastid | 26.91 | 28.03 |
| GSMUA_Achr1P02390_001 | Banana | cytosol | 30.53 | 25.64 |
| GSMUA_Achr5P18920_001 | Banana | cytosol | 28.63 | 25.3 |
| GSMUA_Achr11P... | Banana | cytosol | 28.05 | 23.63 |
| GSMUA_Achr7P23280_001 | Banana | cytosol | 29.01 | 23.46 |
| GSMUA_Achr4P25730_001 | Banana | cytosol | 29.77 | 23.21 |
| GSMUA_Achr6P18680_001 | Banana | cytosol | 29.39 | 22.0 |
| GSMUA_Achr6P25830_001 | Banana | cytosol, nucleus, plasma membrane | 31.49 | 21.88 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.36 | MapMan:27.4.7 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSMUA_Achr2G02460_001 | EnsemblPlants:GSMUA_Achr2P02460_001 | EnsemblPlants:GSMUA_Achr2T02460_001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M0S4I7 |
| PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF284 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0002961286 |
| SEG:seg | : | : | : | : | : |
Description
protein kinase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G02460_001]
Coordinates
chr2:-:8297619..8300790
Molecular Weight (calculated)
57874.9 Da
IEP (calculated)
5.717
GRAVY (calculated)
-0.486
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSKEELDQE EAPKSNSNSV EEQLSPKEAQ KDPSIPVKGT EENEQSSKAE SEDNSVDGSD QRPPDGAALD HNSIVESEAH SVDGSDQNSP RGVLDSTSSA
101: ESDGNSSSSD TSSVDRSIAP CGTRLESHSV QWRNLIAGFI MRKKRSMTRL STFPPATGRS SLRRALERIR SSKDGTESGR IVVEVKMARP SWRSFAYEEL
201: AAATDGFSPD KLVGKGGHAE VYKGCLGDGQ LVAVKRLIKR ESEEERIGDF LSELGIIAHV NHPNAAQLLG FSVEGGLHLV LQFSPHGSLA SLLHGSKEAL
301: DWRVRFQIAA GIAEGLRYLH EGCQRRIIHR DIKASNILLT EDFQPQISDF GLAKWLPDKW NHHVVFPIEG TFGYLAPEYF MHGVVNEKTD VFAFGVLLLE
401: LITGRRAIDS SRQSLVIWAR PLLDANSVKQ LVDPSLEDSY DAKELARALQ VASACIHHLS TSRPTMNEVV RLLRGEEGLM EIIGKESNYK VARPPLIDTC
501: DMDDYTSSRY LNDLHRHKQL ALEQ
101: ESDGNSSSSD TSSVDRSIAP CGTRLESHSV QWRNLIAGFI MRKKRSMTRL STFPPATGRS SLRRALERIR SSKDGTESGR IVVEVKMARP SWRSFAYEEL
201: AAATDGFSPD KLVGKGGHAE VYKGCLGDGQ LVAVKRLIKR ESEEERIGDF LSELGIIAHV NHPNAAQLLG FSVEGGLHLV LQFSPHGSLA SLLHGSKEAL
301: DWRVRFQIAA GIAEGLRYLH EGCQRRIIHR DIKASNILLT EDFQPQISDF GLAKWLPDKW NHHVVFPIEG TFGYLAPEYF MHGVVNEKTD VFAFGVLLLE
401: LITGRRAIDS SRQSLVIWAR PLLDANSVKQ LVDPSLEDSY DAKELARALQ VASACIHHLS TSRPTMNEVV RLLRGEEGLM EIIGKESNYK VARPPLIDTC
501: DMDDYTSSRY LNDLHRHKQL ALEQ
001: MAVEDNKNSE SKNHQEVELH RNDLGLEDSS SPRGVLGMVS DSDNSSSSCS SCSSDDKSSS TSSPFSNTTK TVSSSHHGLQ WNKMIESIKK KSMRRFSVIP
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
Arabidopsis Description
RBK1RBK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.