Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24410_001 | Banana | cytosol | 53.55 | 65.77 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 51.91 | 64.19 |
| GSMUA_Achr11P... | Banana | cytosol | 34.97 | 62.75 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 50.27 | 62.16 |
| KRH31638 | Soybean | cytosol | 50.27 | 61.33 |
| Solyc06g053930.2.1 | Tomato | cytosol | 49.73 | 61.07 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 49.73 | 61.07 |
| KRH69070 | Soybean | cytosol | 49.73 | 60.67 |
| KRH34350 | Soybean | cytosol | 49.73 | 60.67 |
| KRG92449 | Soybean | cytosol | 49.73 | 60.67 |
| PGSC0003DMT400042062 | Potato | cytosol | 49.73 | 60.67 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 49.18 | 60.4 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr10P... | Banana | cytosol | 49.18 | 60.4 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 49.18 | 60.4 |
| CDX94883 | Canola | cytosol | 36.61 | 60.36 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 38.25 | 60.34 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 48.63 | 60.14 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 48.63 | 60.14 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 48.63 | 60.14 |
| CDY34215 | Canola | cytosol | 50.82 | 59.62 |
| Bra023786.1-P | Field mustard | cytosol | 50.82 | 59.62 |
| AT4G14640.1 | Thale cress | cytosol | 49.18 | 59.6 |
| Bra001892.1-P | Field mustard | cytosol | 49.73 | 59.09 |
| CDX92965 | Canola | cytosol | 49.73 | 59.09 |
| KRH68729 | Soybean | cytosol | 48.09 | 59.06 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 47.54 | 58.78 |
| KRH67274 | Soybean | cytosol | 47.54 | 58.78 |
| KRG95596 | Soybean | cytosol | 47.54 | 58.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.99 | 58.5 |
| CDY10325 | Canola | cytosol | 36.07 | 58.41 |
| KRG96966 | Soybean | cytosol | 47.54 | 58.39 |
| CDY06478 | Canola | cytosol | 47.54 | 57.62 |
| CDY10686 | Canola | cytosol | 48.63 | 57.42 |
| Bra033898.1-P | Field mustard | cytosol | 48.63 | 57.42 |
| Bra039723.1-P | Field mustard | cytosol | 47.54 | 56.86 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 46.99 | 56.21 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 43.72 | 53.69 |
| AT3G22930.1 | Thale cress | cytosol | 49.73 | 52.6 |
| KRH34082 | Soybean | cytosol | 42.62 | 52.35 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 42.08 | 52.03 |
| CDY40824 | Canola | cytosol | 50.82 | 51.67 |
| KRG92667 | Soybean | cytosol | 40.98 | 50.34 |
| Solyc03g005240.1.1 | Tomato | cytosol | 42.08 | 50.33 |
| PGSC0003DMT400034833 | Potato | cytosol | 42.08 | 50.33 |
| Solyc01g105630.2.1 | Tomato | cytosol | 39.89 | 49.66 |
| PGSC0003DMT400083727 | Potato | cytosol | 39.89 | 49.66 |
| KRG94637 | Soybean | cytosol | 28.96 | 46.49 |
| GSMUA_Achr10P... | Banana | cytosol | 46.45 | 45.21 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 55.74 | 45.13 |
| GSMUA_Achr10P... | Banana | cytosol | 45.9 | 44.44 |
| KRH71363 | Soybean | cytosol | 36.07 | 44.3 |
| KRH32074 | Soybean | cytosol | 34.97 | 42.95 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 31.69 | 35.58 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 29.51 | 33.13 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 29.51 | 33.13 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 26.23 | 32.43 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 28.96 | 32.32 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 25.68 | 19.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P25390_001 | EnsemblPlants:GSMUA_Achr3T25390_001 | EnsemblPlantsGene:GSMUA_Achr3G25390_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SEG:seg |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00029654BC | UniProt:M0SHQ5 | MapMan:35.1 | : |
Description
Calmodulin-related protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G25390_001]
Coordinates
chr3:+:25585824..25589306
Molecular Weight (calculated)
21028.7 Da
IEP (calculated)
4.064
GRAVY (calculated)
-0.589
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGFMDLTAE HKEVFSLFDK DGDGHITLEE LRTIIRSLGR EPTLQELQDM IREVDVDGNG TIEFDEFLNV MAMRTKAEAE EELREAFKVF DIDNNGYISP
101: SELMSVMTNL GEEVTKEIAA EMIMEVDADG DGQVDFKEFS TLMMAIGTTP TNSFSSLMGE RERERERERE RWQKSNIQQQ NCS
101: SELMSVMTNL GEEVTKEIAA EMIMEVDADG DGQVDFKEFS TLMMAIGTTP TNSFSSLMGE RERERERERE RWQKSNIQQQ NCS
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.