Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400095174 | Potato | cytosol | 39.36 | 51.33 |
| KRH67133 | Soybean | cytosol | 41.11 | 46.38 |
| HORVU4Hr1G019460.1 | Barley | plasma membrane | 63.56 | 34.6 |
| KXG29404 | Sorghum | plasma membrane | 63.85 | 34.33 |
| TraesCS4A01G205800.1 | Wheat | plasma membrane | 62.97 | 34.18 |
| TraesCS4D01G106700.1 | Wheat | plasma membrane | 62.68 | 34.02 |
| TraesCS4B01G109400.1 | Wheat | plasma membrane | 60.35 | 33.99 |
| Os01t0384300-00 | Rice | plasma membrane | 63.27 | 33.91 |
| AT2G48010.1 | Thale cress | plasma membrane | 60.93 | 33.87 |
| VIT_07s0104g00840.t01 | Wine grape | plasma membrane | 63.85 | 33.44 |
| VIT_14s0030g00350.t01 | Wine grape | cytosol | 52.77 | 33.09 |
| Bra023063.1-P | Field mustard | plasma membrane | 59.77 | 32.91 |
| CDX84563 | Canola | plasma membrane | 59.77 | 32.91 |
| CDX79672 | Canola | plasma membrane | 59.48 | 32.9 |
| KRH71493 | Soybean | plasma membrane | 59.77 | 32.8 |
| KRH31961 | Soybean | plasma membrane | 59.77 | 32.59 |
| Solyc09g074240.1.1 | Tomato | plasma membrane | 60.06 | 32.29 |
| KRG95456 | Soybean | plasma membrane | 50.73 | 30.21 |
| KRG95455 | Soybean | plasma membrane | 55.69 | 30.03 |
| KRH67131 | Soybean | plasma membrane | 56.56 | 30.03 |
| Zm00001d015163_P001 | Maize | plasma membrane | 42.57 | 27.19 |
| GSMUA_Achr11P... | Banana | plasma membrane | 25.07 | 15.33 |
| GSMUA_Achr5P25920_001 | Banana | plasma membrane | 15.45 | 12.62 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | MapMan:50.2.7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr8G33610_001 | EnsemblPlants:GSMUA_Achr8P33610_001 | EnsemblPlants:GSMUA_Achr8T33610_001 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M0TVW3 | PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR27006 | PANTHER:PTHR27006:SF36 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI000294B351 | SEG:seg | : | : | : | : |
Description
Putative Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G33610_001]
Coordinates
chr8:-:34606242..34607720
Molecular Weight (calculated)
36691.4 Da
IEP (calculated)
6.413
GRAVY (calculated)
-0.058
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRNCNQSFQ TTPACTACTV SLNRVKAAYL PGPNHGNVSD CASYPAIYAG GAISSLGPSD GANAYCFFLL SPNTSAPSPS GGGSSTWIYG VAAGCFVEPS
101: LALESISAST TLVKFRFDDI KQATKNFSRD NIIGRGGYGN VYKGGHQRII VCDLMRNGSL HDHLFGTGDH RLIQPAIIHR DIKASNILLD EMFEPKVADF
201: GLARFAPEGM SHVSTRVAGT LGYVAPEYAL YGQLTEKSDV YSFGVVLLEL LSGKKAFKYV LVAVLCTHPQ LHARPKMDQI VKILETDLAV PSIPDRPISI
301: VSNIEDIERS VSSSGSGQLS SFAGYQPFAF GNDDVSSDDS EKA
101: LALESISAST TLVKFRFDDI KQATKNFSRD NIIGRGGYGN VYKGGHQRII VCDLMRNGSL HDHLFGTGDH RLIQPAIIHR DIKASNILLD EMFEPKVADF
201: GLARFAPEGM SHVSTRVAGT LGYVAPEYAL YGQLTEKSDV YSFGVVLLEL LSGKKAFKYV LVAVLCTHPQ LHARPKMDQI VKILETDLAV PSIPDRPISI
301: VSNIEDIERS VSSSGSGQLS SFAGYQPFAF GNDDVSSDDS EKA
001: MPNSILFLLL SFLYLTNCVA QSPSQTCPLD FSHVLTIPWN TTDCQKSDKS ADSKNSCCQS LLTLIGIPLA HRLKQTSNFR LPNLATSISC LNNLQTKLSS
101: LSLSSNLTSL CFDPNQFVIN NETCAGIQTT QDWVSRLGPS TALDSACSSG LTDLTRCDAC VAAGFRVQKQ LITLDGNSSH GVYCYHFVVT YAAGIVNKKG
201: PESDDALSCL FSLSLRSPLN SKKKRHTVAL ALGITGAIFG ALVIAGLICL YFRFGKAVKG GEVGWEDQGS RPKWRPNTGS IWFKIEELEK ATNNFSQKNF
301: IGRGGFGFVY KGVLPDGSVI AVKKVIESEF QGDAEFRNEV EIISNLKHRN LVPLRGCSMV DDDSESQRYL VYDYMSNGNL DDHLFPRGET TKMPLSWPQR
401: KSIILDVAKG LAYLHYGVKP AIYHRDIKGT NILLDVDMRA RVADFGLAKQ SREGESHLTT RVAGTHGYLA PEYALYGQLT EKSDVYSFGV VILEIMCGRK
501: ALDLSTSGSP NTFLITDWAW SLVKAGKTEE ALEQSLLREE GSGLSNPKGI MERFLQVGIL CAHVLVALRP TILDALKMLE GDIEVPPIPD RPVPLAHPSY
601: RMDGNGFTIS PALSGLQIHS GDMLR
101: LSLSSNLTSL CFDPNQFVIN NETCAGIQTT QDWVSRLGPS TALDSACSSG LTDLTRCDAC VAAGFRVQKQ LITLDGNSSH GVYCYHFVVT YAAGIVNKKG
201: PESDDALSCL FSLSLRSPLN SKKKRHTVAL ALGITGAIFG ALVIAGLICL YFRFGKAVKG GEVGWEDQGS RPKWRPNTGS IWFKIEELEK ATNNFSQKNF
301: IGRGGFGFVY KGVLPDGSVI AVKKVIESEF QGDAEFRNEV EIISNLKHRN LVPLRGCSMV DDDSESQRYL VYDYMSNGNL DDHLFPRGET TKMPLSWPQR
401: KSIILDVAKG LAYLHYGVKP AIYHRDIKGT NILLDVDMRA RVADFGLAKQ SREGESHLTT RVAGTHGYLA PEYALYGQLT EKSDVYSFGV VILEIMCGRK
501: ALDLSTSGSP NTFLITDWAW SLVKAGKTEE ALEQSLLREE GSGLSNPKGI MERFLQVGIL CAHVLVALRP TILDALKMLE GDIEVPPIPD RPVPLAHPSY
601: RMDGNGFTIS PALSGLQIHS GDMLR
Arabidopsis Description
Probable receptor-like protein kinase At1g11050 [Source:UniProtKB/Swiss-Prot;Acc:O04086]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.