Factsheet for Zm00001d015163_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT2G48010.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT2G48010.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT2G48010.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT2G48010.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT2G48010.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT2G48010.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT2G48010.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29404	Sorghum	plasma membrane	93.3	78.53
Os01t0384300-00	Rice	plasma membrane	76.16	63.91
TraesCS4A01G205800.1	Wheat	plasma membrane	74.67	63.45
TraesCS4D01G106700.1	Wheat	plasma membrane	74.3	63.13
HORVU4Hr1G019460.1	Barley	plasma membrane	72.81	62.06
TraesCS4B01G109400.1	Wheat	plasma membrane	70.02	61.74
KRH67133	Soybean	cytosol	25.33	44.74
GSMUA_Achr8P33610_001	Banana	plastid	27.19	42.57
AT2G48010.1	Thale cress	plasma membrane	42.64	37.12
CDX79672	Canola	plasma membrane	42.09	36.45
KRH71493	Soybean	plasma membrane	42.27	36.32
KRH31961	Soybean	plasma membrane	42.46	36.25
Bra023063.1-P	Field mustard	plasma membrane	41.9	36.12
CDX84563	Canola	plasma membrane	41.9	36.12
Solyc09g074240.1.1	Tomato	plasma membrane	42.64	35.89
VIT_07s0104g00840.t01	Wine grape	plasma membrane	43.58	35.73
KRG95456	Soybean	plasma membrane	37.43	34.9
VIT_14s0030g00350.t01	Wine grape	cytosol	33.89	33.27
KRG95455	Soybean	plasma membrane	39.11	33.02
KRH67131	Soybean	plasma membrane	39.11	32.51
PGSC0003DMT400095174	Potato	cytosol	14.9	30.42
Zm00001d010234_P001	Maize	plasma membrane	28.68	23.69
Zm00001d012216_P001	Maize	plasma membrane	28.12	23.34

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A1D6GZP4	ProteinID:AQK68201.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008457766	EnsemblPlantsGene:Zm00001d015163	EnsemblPlants:Zm00001d015163_P001	EnsemblPlants:Zm00001d015163_T001
SEG:seg	:	:	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase RKF3

Coordinates

chr5:+:78140680..78142581

Molecular Weight (calculated)

56204.4 Da

IEP (calculated)

7.218

GRAVY (calculated)

0.216

Length

537 amino acids

Sequence
(BLAST)

001: MCRLRLLLPF FLLLRPIPHA SQPAAPSPAL QCALNFTALL PFLAPPLPSD DASRCAVATQ SVAFLLSLHL AATSSFVLPP DASSCLSPLR AALPYPLPAS
101: ACGLSGLDAA LASPGCGNVS TVADFDALVP PSSRGDIDAS CDRDLSAVPD CTACSTALSK AAAAYLLAGS PSARSNNVTG CVQYPSIYAG AEASPHGPAD
201: PATAYCLFLL KANPPQSHSS GAAPWVYGVA FGSLAAVLLL AAALGCCFVV RRRQARDAAA ALAADSRSKR SQAMESISAS TTLVKFTYDD IKAATDGFAR
301: KSIIGQGGFG NVYKGVLRDG AEVAVKRFKN CSAAGDAAFA HEVEVVASVR HVNLVALRGY CIATTQREGH QRMIVCDLMH NGSLYDHLFA AGECQLAWPL
401: LSGKKAFISL SEGQSFVLTD WAWSLVRRGR TVEVIQEGMV DPGPTKVMEK YVLVGALCTH PQLHARPTME QALKILEADS VPSPLIIPER PIPVVANLAE
501: IERSASSSGS GQLFSPSGFR SFIHANEDAA LVSPNDT

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.