Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09201 | Sorghum | cytosol | 92.41 | 81.11 |
| Zm00001d005003_P002 | Maize | cytosol | 88.61 | 77.78 |
| Zm00001d008278_P001 | Maize | cytosol | 58.23 | 72.44 |
| PGSC0003DMT400046278 | Potato | cytosol | 34.81 | 71.43 |
| Bra025438.1-P | Field mustard | cytosol | 50.63 | 70.8 |
| PGSC0003DMT400054299 | Potato | cytosol | 50.63 | 70.8 |
| KRH18664 | Soybean | cytosol | 58.23 | 65.71 |
| AT5G21274.1 | Thale cress | cytosol | 59.49 | 63.09 |
| CDX92401 | Canola | cytosol | 53.16 | 62.69 |
| Zm00001d047597_P001 | Maize | cytosol | 58.23 | 62.59 |
| Solyc10g077010.1.1 | Tomato | cytosol | 58.86 | 62.42 |
| CDY04474 | Canola | cytosol | 58.86 | 62.42 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 58.86 | 62.42 |
| CDY56411 | Canola | cytosol | 58.86 | 62.42 |
| Solyc10g081170.1.1 | Tomato | extracellular | 58.86 | 62.42 |
| KRG94975 | Soybean | nucleus | 58.86 | 62.42 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 58.86 | 62.42 |
| PGSC0003DMT400018569 | Potato | cytosol | 58.86 | 62.42 |
| PGSC0003DMT400058435 | Potato | cytosol | 58.86 | 62.42 |
| PGSC0003DMT400070437 | Potato | cytosol | 58.86 | 62.42 |
| Solyc01g008950.2.1 | Tomato | nucleus | 58.86 | 62.42 |
| Bra002368.1-P | Field mustard | cytosol | 58.86 | 62.42 |
| Solyc12g099990.1.1 | Tomato | nucleus | 58.86 | 62.42 |
| Bra020155.1-P | Field mustard | cytosol | 58.86 | 62.42 |
| Bra006595.1-P | Field mustard | cytosol | 58.86 | 62.42 |
| Bra019453.1-P | Field mustard | cytosol | 58.86 | 62.42 |
| Solyc11g072240.1.1 | Tomato | cytosol | 58.86 | 62.42 |
| Bra012037.1-P | Field mustard | cytosol | 58.86 | 62.42 |
| AT3G56800.1 | Thale cress | cytosol | 58.23 | 61.74 |
| Bra003251.1-P | Field mustard | cytosol | 58.23 | 61.74 |
| CDX99690 | Canola | cytosol | 58.23 | 61.74 |
| Bra000214.1-P | Field mustard | cytosol | 58.23 | 61.74 |
| Bra014671.1-P | Field mustard | cytosol | 58.23 | 61.74 |
| CDY65072 | Canola | cytosol | 58.23 | 61.74 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 47.47 | 61.48 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 59.49 | 61.44 |
| CDY55678 | Canola | cytosol | 57.59 | 61.07 |
| Bra007269.1-P | Field mustard | cytosol | 57.59 | 61.07 |
| Bra004166.1-P | Field mustard | cytosol | 57.59 | 61.07 |
| CDX96148 | Canola | cytosol | 57.59 | 61.07 |
| CDY12321 | Canola | cytosol | 55.7 | 60.69 |
| Bra034981.1-P | Field mustard | cytosol | 55.7 | 60.69 |
| CDY27651 | Canola | cytosol | 56.96 | 60.0 |
| CDX75970 | Canola | cytosol | 41.77 | 57.89 |
| AT1G66410.2 | Thale cress | cytosol | 57.59 | 57.23 |
| AT2G41110.2 | Thale cress | cytosol | 58.23 | 57.14 |
| CDY48191 | Canola | cytosol | 63.29 | 55.87 |
| Bra034317.1-P | Field mustard | cytosol | 63.29 | 55.87 |
| CDX77060 | Canola | cytosol | 63.29 | 55.56 |
| Zm00001d038543_P004 | Maize | plastid | 58.86 | 55.03 |
| AT2G27030.3 | Thale cress | cytosol | 62.66 | 54.7 |
| Zm00001d043144_P001 | Maize | plasma membrane | 63.29 | 54.64 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 58.23 | 53.18 |
| AT5G37780.3 | Thale cress | cytosol | 57.59 | 52.0 |
| Os01t0810300-01 | Rice | plasma membrane | 60.76 | 51.34 |
| KRG89812 | Soybean | cytosol, mitochondrion | 52.53 | 50.3 |
| Zm00001d028948_P001 | Maize | cytosol | 59.49 | 47.72 |
| CDY57144 | Canola | cytosol | 43.04 | 46.58 |
| AT3G43810.2 | Thale cress | cytosol | 62.66 | 46.26 |
| CDY30947 | Canola | cytosol | 60.76 | 45.93 |
| Zm00001d041430_P001 | Maize | cytosol | 48.73 | 45.56 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 62.03 | 44.34 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 64.56 | 44.16 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 67.09 | 43.98 |
| CDY21220 | Canola | cytosol | 60.13 | 42.99 |
| Zm00001d033980_P001 | Maize | cytosol | 42.41 | 42.68 |
| Zm00001d010649_P001 | Maize | extracellular | 34.18 | 38.03 |
| Zm00001d053188_P001 | Maize | cytosol | 25.95 | 37.61 |
| AT2G41090.1 | Thale cress | cytosol | 41.14 | 34.03 |
| Zm00001d049665_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 31.01 | 33.11 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 35.44 | 32.56 |
| Zm00001d035095_P001 | Maize | cytosol, extracellular, mitochondrion | 30.38 | 32.43 |
| Zm00001d014271_P001 | Maize | cytosol | 36.08 | 31.84 |
| Zm00001d039110_P001 | Maize | cytosol | 33.54 | 30.81 |
| Zm00001d044411_P001 | Maize | plastid | 32.28 | 21.79 |
| AT2G41100.1 | Thale cress | cytosol | 43.67 | 21.3 |
Protein Annotations
| EnsemblPlants:Zm00001d052415_P001 | EnsemblPlants:Zm00001d052415_T001 | EnsemblPlantsGene:Zm00001d052415 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF165 | PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:AQK57168.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000842EF41 | UniProt:A0A1D6QH05 | MapMan:35.1 | : |
Description
Calmodulin protein
Coordinates
chr4:+:189488248..189489580
Molecular Weight (calculated)
17848.8 Da
IEP (calculated)
4.131
GRAVY (calculated)
-0.741
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEMKPGTIT TKELGTVMRS LGQTPTEEEL QGMVDEVDAD GSGAIDFQEF LTLMARQMRE ASGADEEELR EAFRVFDQDQ NGFISREELR HVLQNLGERL
101: SDDELAEMLR EADADGDGQI NYTEFTKVML AKRRNQELED HGSESSHSKR LCPSCTIL
101: SDDELAEMLR EADADGDGQI NYTEFTKVML AKRRNQELED HGSESSHSKR LCPSCTIL
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.