Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98550 | Sorghum | nucleus | 91.59 | 86.34 |
| Zm00001d005300_P001 | Maize | nucleus | 67.54 | 81.75 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 70.72 | 72.84 |
| Os09t0106700-01 | Rice | nucleus | 67.25 | 72.73 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 70.72 | 72.62 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 70.72 | 71.14 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 46.38 | 59.48 |
| KRH05621 | Soybean | nucleus | 44.64 | 57.46 |
| KRH61351 | Soybean | nucleus | 42.61 | 56.76 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 51.3 | 56.55 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 51.01 | 56.41 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 45.22 | 55.32 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 46.38 | 55.17 |
| KRH57983 | Soybean | nucleus | 46.96 | 54.92 |
| KRH15420 | Soybean | nucleus | 43.19 | 54.58 |
| HORVU5Hr1G049880.1 | Barley | plastid | 66.96 | 54.48 |
| KRH28419 | Soybean | nucleus | 46.67 | 54.21 |
| CDY22442 | Canola | nucleus | 42.61 | 53.45 |
| KRH77058 | Soybean | nucleus | 47.25 | 53.44 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 45.8 | 53.2 |
| PGSC0003DMT400008569 | Potato | nucleus | 48.99 | 52.81 |
| Solyc04g078420.1.1 | Tomato | nucleus | 49.86 | 52.44 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 40.0 | 51.88 |
| Bra032176.1-P | Field mustard | nucleus | 43.77 | 51.71 |
| CDY38933 | Canola | nucleus | 43.77 | 51.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.32 | 51.59 |
| CDY44045 | Canola | nucleus | 42.61 | 51.58 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 42.9 | 51.39 |
| CDY12830 | Canola | nucleus | 37.68 | 51.38 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 44.64 | 50.99 |
| VIT_03s0180g00210.t01 | Wine grape | nucleus | 44.64 | 50.83 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 42.32 | 50.69 |
| CDX89554 | Canola | nucleus | 42.61 | 50.17 |
| Bra012149.1-P | Field mustard | nucleus | 42.9 | 50.0 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 42.9 | 50.0 |
| CDY29542 | Canola | nucleus | 37.68 | 49.06 |
| Bra017813.1-P | Field mustard | nucleus | 37.68 | 49.06 |
| CDY01420 | Canola | nucleus | 37.39 | 49.05 |
| Zm00001d015614_P001 | Maize | nucleus | 43.19 | 49.01 |
| CDX75635 | Canola | nucleus | 42.03 | 48.49 |
| Bra012910.1-P | Field mustard | nucleus | 41.16 | 48.46 |
| CDX72621 | Canola | nucleus | 37.1 | 48.3 |
| CDY23023 | Canola | nucleus | 40.58 | 48.28 |
| Bra010593.1-P | Field mustard | nucleus | 42.61 | 48.2 |
| AT5G67300.1 | Thale cress | nucleus | 42.32 | 47.87 |
| CDY02098 | Canola | nucleus | 40.58 | 47.78 |
| Zm00001d046632_P001 | Maize | nucleus | 42.03 | 47.7 |
| CDX69287 | Canola | nucleus | 42.03 | 47.39 |
| Solyc02g092930.1.1 | Tomato | nucleus | 49.28 | 47.09 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 50.43 | 46.9 |
| CDY30608 | Canola | nucleus | 35.94 | 46.79 |
| CDY57355 | Canola | nucleus | 37.39 | 46.4 |
| AT2G23290.1 | Thale cress | nucleus | 41.45 | 46.28 |
| Bra036048.1-P | Field mustard | nucleus | 35.65 | 46.24 |
| AT3G50060.1 | Thale cress | nucleus | 39.71 | 45.51 |
| AT4G37260.1 | Thale cress | nucleus | 41.74 | 45.0 |
| Bra011749.1-P | Field mustard | nucleus | 42.32 | 44.51 |
| Bra029990.1-P | Field mustard | nucleus | 37.68 | 44.22 |
| Zm00001d036768_P001 | Maize | nucleus | 39.42 | 44.16 |
| Zm00001d041935_P001 | Maize | nucleus | 28.99 | 37.88 |
| CDX68566 | Canola | nucleus | 33.91 | 37.26 |
| Zm00001d004681_P001 | Maize | nucleus | 18.55 | 33.51 |
| Zm00001d041818_P001 | Maize | nucleus | 19.42 | 29.78 |
| Zm00001d040428_P001 | Maize | nucleus | 22.32 | 27.21 |
| Zm00001d033815_P001 | Maize | nucleus | 19.42 | 27.02 |
| Zm00001d013399_P001 | Maize | nucleus | 18.55 | 26.67 |
| Zm00001d040426_P001 | Maize | nucleus | 21.45 | 26.62 |
| Zm00001d040423_P001 | Maize | nucleus | 22.9 | 26.51 |
| Zm00001d037994_P001 | Maize | nucleus | 28.12 | 26.29 |
| Zm00001d037999_P001 | Maize | nucleus | 22.03 | 26.12 |
| Zm00001d008251_P002 | Maize | nucleus | 22.03 | 25.42 |
| Zm00001d049079_P001 | Maize | nucleus | 20.29 | 25.27 |
| Zm00001d037998_P001 | Maize | nucleus | 22.03 | 23.68 |
| Zm00001d012379_P001 | Maize | nucleus | 26.67 | 22.94 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 21.74 | 19.63 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100284969 | MapMan:15.5.2.1 | UniProt:B6TZ85 | EMBL:EU970300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| ProteinID:ONM53604.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF940 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000182EAB1 | EnsemblPlantsGene:Zm00001d019712 | EnsemblPlants:Zm00001d019712_P001 | EnsemblPlants:Zm00001d019712_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 153Sucrose responsive element binding protein
Coordinates
chr7:+:53178504..53179541
Molecular Weight (calculated)
36930.7 Da
IEP (calculated)
9.536
GRAVY (calculated)
-0.510
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSPSCRG SGGKSDVDRI KGPWSPEEDE ALQRLVARHG ARNWSLISRS IPGRSGKSCR LRWCNQLSPQ VEHRPFTAEE DDTILRAHAR FGNKWATIAR
101: LLSGRTDNAI KNHWNSTLKR KYYAASDAVV ADADDERPLK RTSSDGHPGL CFSPGSPSGS DLSDSSNHSL PSVMPSAASA AAVTSHQQQQ HVYRPVPRAG
201: GVVMLPVAPL APPPPPQPPA TSLSLSLSLP GLDGQKPEAS QAVLTPAPAP PQPPLQIQQQ QPAPPQMPPP QAQPSLPFQL QAAATNLTSQ QPAAAPFSSE
301: FLLLMQEMIR IEVRNYMSGS GLDPRTDGAA VHAVSKRMMG MAKIE
101: LLSGRTDNAI KNHWNSTLKR KYYAASDAVV ADADDERPLK RTSSDGHPGL CFSPGSPSGS DLSDSSNHSL PSVMPSAASA AAVTSHQQQQ HVYRPVPRAG
201: GVVMLPVAPL APPPPPQPPA TSLSLSLSLP GLDGQKPEAS QAVLTPAPAP PQPPLQIQQQ QPAPPQMPPP QAQPSLPFQL QAAATNLTSQ QPAAAPFSSE
301: FLLLMQEMIR IEVRNYMSGS GLDPRTDGAA VHAVSKRMMG MAKIE
001: MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
Arabidopsis Description
MYB44MYBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.