Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013859_P002 | |
| Zm00001d014037_P004 | |
| Zm00001d032464_P008 | |
| Zm00001d032708_P009 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79022 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 95.64 | 95.64 |
| Os12t0286600-01 | Rice | cytosol, plastid | 88.28 | 85.94 |
| CDY31930 | Canola | cytosol | 13.35 | 76.56 |
| GSMUA_Achr3P17130_001 | Banana | plastid | 74.11 | 74.11 |
| GSMUA_Achr9P02010_001 | Banana | plastid | 73.84 | 73.84 |
| GSMUA_Achr8P28640_001 | Banana | plastid | 72.21 | 72.21 |
| VIT_14s0219g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 70.03 | 69.84 |
| KRH07089 | Soybean | cytosol | 69.75 | 69.57 |
| Solyc02g067920.2.1 | Tomato | cytosol | 69.48 | 68.92 |
| GSMUA_Achr9P07620_001 | Banana | plastid | 68.66 | 68.48 |
| CDY37504 | Canola | cytosol | 14.17 | 68.42 |
| PGSC0003DMT400039199 | Potato | cytosol | 68.94 | 68.19 |
| PGSC0003DMT400017818 | Potato | cytosol | 68.94 | 68.19 |
| Solyc03g111770.2.1 | Tomato | cytosol | 68.66 | 67.92 |
| KRG93968 | Soybean | cytosol | 67.57 | 67.57 |
| KRH58237 | Soybean | cytosol | 67.03 | 67.03 |
| AT3G01690.1 | Thale cress | cytosol, plastid | 65.12 | 66.2 |
| CDY37505 | Canola | cytosol, extracellular | 11.99 | 65.67 |
| VIT_17s0000g09740.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 68.94 | 65.37 |
| KRH54278 | Soybean | endoplasmic reticulum | 67.57 | 65.09 |
| AT4G24760.1 | Thale cress | cytosol, nucleus, plastid | 64.58 | 64.93 |
| CDX91066 | Canola | plastid | 57.49 | 64.33 |
| KRH63667 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 66.48 | 64.21 |
| CDY03421 | Canola | cytosol | 62.67 | 64.07 |
| Bra013831.1-P | Field mustard | cytosol | 62.94 | 63.11 |
| CDY34308 | Canola | cytosol | 62.94 | 63.11 |
| AT5G14390.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 62.67 | 62.33 |
| Bra008761.1-P | Field mustard | endoplasmic reticulum | 62.67 | 62.16 |
| CDY09851 | Canola | plastid | 62.67 | 62.16 |
| CDX69584 | Canola | endoplasmic reticulum | 62.67 | 62.16 |
| KRH03885 | Soybean | cytosol, plastid | 62.67 | 61.99 |
| KRH57170 | Soybean | plastid | 62.4 | 61.73 |
| CDY32850 | Canola | cytosol | 57.77 | 61.63 |
| CDY28862 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 59.13 | 60.11 |
| CDY28668 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 59.13 | 60.11 |
| KRG94364 | Soybean | cytosol | 22.34 | 58.99 |
| CDX85599 | Canola | cytosol | 41.42 | 58.24 |
| CDX77081 | Canola | plastid | 32.97 | 57.35 |
| CDY11031 | Canola | cytosol, plastid | 37.33 | 57.32 |
| Bra023463.1-P | Field mustard | cytosol | 41.42 | 55.27 |
| CDX92650 | Canola | cytosol | 64.58 | 54.61 |
| Zm00001d011624_P001 | Maize | plastid | 54.5 | 54.05 |
| Zm00001d043801_P002 | Maize | plastid | 53.41 | 52.97 |
| Bra040701.1-P | Field mustard | plastid | 46.32 | 52.31 |
| Zm00001d046660_P001 | Maize | plastid | 59.13 | 51.54 |
| Zm00001d015656_P001 | Maize | plastid | 60.49 | 51.39 |
| GSMUA_Achr9P22710_001 | Banana | endoplasmic reticulum, golgi | 45.23 | 50.76 |
| Zm00001d052810_P001 | Maize | cytosol | 57.77 | 50.72 |
| Zm00001d012172_P001 | Maize | mitochondrion | 29.7 | 46.58 |
| KRG99188 | Soybean | extracellular | 12.81 | 44.76 |
| Zm00001d053705_P001 | Maize | cytosol | 25.89 | 43.98 |
| CDY53272 | Canola | plastid | 18.8 | 43.95 |
| Bra019211.1-P | Field mustard | nucleus | 63.76 | 42.39 |
| Zm00001d024530_P001 | Maize | cytosol | 43.32 | 37.5 |
| Zm00001d042401_P001 | Maize | plastid | 41.42 | 31.41 |
Protein Annotations
| EMBL:BT040839 | EnsemblPlants:Zm00001d030601_P001 | EnsemblPlants:Zm00001d030601_T001 | EnsemblPlantsGene:Zm00001d030601 | EntrezGene:100273334 | Gene3D:3.40.50.1820 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 | ProteinID:ONM01157.1 | SEG:seg | SUPFAM:SSF53474 |
| UniParc:UPI00017B7BD8 | UniProt:B4FUQ1 | MapMan:35.2 | : | : | : |
Description
alpha/beta-Hydrolases superfamily protein
Coordinates
chr1:-:147622995..147641527
Molecular Weight (calculated)
42085.0 Da
IEP (calculated)
9.510
GRAVY (calculated)
-0.595
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVTSSVAA KMAFFPPTPP SYALVEDAGA GVTTLSGQPH RENVELLRFR TRKGNTLAAM YVRHPDAAST VLYSHGNAAD LGHLYQLFLH LSFNLRVNIL
101: GYDYSGYGQS SGKPSEHNTY ADIEAAYKCL IEKFGAKEEE IILYGQSVGS GPTVDLASRL SQLRAVVLHS PILSGLRVMY PVKRTYWFDI YKNIDKIPQV
201: TCPVLIIHGT ADEVVDWSHG KQLWELCKDK YEPLWLRGGK HCDLELFPEY IRHLKNFFHS LEKSPSHRQA WRENVDRIEP SRKSTDFFEP SRKSTDQRKK
301: SRSTRDKTRN TEHRYSNVEK VDKLKISFDQ FEKSRRSVDI FERPKRNIEQ LDCGRKSVDR LDRIWAS
101: GYDYSGYGQS SGKPSEHNTY ADIEAAYKCL IEKFGAKEEE IILYGQSVGS GPTVDLASRL SQLRAVVLHS PILSGLRVMY PVKRTYWFDI YKNIDKIPQV
201: TCPVLIIHGT ADEVVDWSHG KQLWELCKDK YEPLWLRGGK HCDLELFPEY IRHLKNFFHS LEKSPSHRQA WRENVDRIEP SRKSTDFFEP SRKSTDQRKK
301: SRSTRDKTRN TEHRYSNVEK VDKLKISFDQ FEKSRRSVDI FERPKRNIEQ LDCGRKSVDR LDRIWAS
001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.