CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34308	Canola	cytosol	99.16	97.27
AT4G24760.1	Thale cress	cytosol, nucleus, plastid	94.43	92.88
CDY31930	Canola	cytosol	15.6	87.5
CDY11031	Canola	cytosol, plastid	54.87	82.43
CDX92650	Canola	cytosol	93.59	77.42
Solyc03g111770.2.1	Tomato	cytosol	77.72	75.2
PGSC0003DMT400039199	Potato	cytosol	77.72	75.2
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	78.83	73.13
CDX91066	Canola	plastid	66.3	72.56
KRH54278	Soybean	endoplasmic reticulum	76.32	71.92
CDY37505	Canola	cytosol, extracellular	13.37	71.64
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	75.77	71.58
GSMUA_Achr3P17130_001	Banana	plastid	72.14	70.57
GSMUA_Achr8P28640_001	Banana	plastid	71.87	70.3
GSMUA_Achr9P02010_001	Banana	plastid	71.87	70.3
CDX69584	Canola	endoplasmic reticulum	71.59	69.46
CDY09851	Canola	plastid	71.31	69.19
CDY37504	Canola	cytosol	14.48	68.42
GSMUA_Achr9P07620_001	Banana	plastid	68.25	66.58
CDY32850	Canola	cytosol	63.51	66.28
Os12t0286600-01	Rice	cytosol, plastid	68.52	65.25
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	66.3	64.85
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	65.18	64.82
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	65.18	64.82
CDX85599	Canola	cytosol	45.68	62.84
Zm00001d030601_P001	Maize	plastid	64.07	62.67
CDX77081	Canola	plastid	35.93	61.14
CDY20302	Canola	cytosol	44.29	60.23
CDY27016	Canola	plastid	56.82	59.65
CDY51065	Canola	plastid	56.82	59.3
CDY51485	Canola	cytosol	48.19	58.84
CDX72285	Canola	cytosol	47.91	58.5
CDX68717	Canola	cytosol	47.63	58.16
CDY13406	Canola	cytosol	47.63	58.16
CDY23273	Canola	cytosol	47.63	58.16
CDY35777	Canola	cytosol	61.0	58.09
CDX86348	Canola	cytosol, nucleus, plastid	61.56	57.85
CDY28238	Canola	cytosol	47.35	57.82
CDX85290	Canola	cytosol, nucleus, plastid	61.28	57.59
CDY20301	Canola	cytosol	46.8	56.95
CDY55247	Canola	cytosol	46.24	56.46
CDY34778	Canola	cytosol	45.96	56.12
CDX98113	Canola	plastid	55.99	55.22
CDY56180	Canola	plastid	55.43	54.82
CDY46139	Canola	cytosol	37.6	53.57
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	48.47	53.21
CDY35552	Canola	plastid	45.13	46.42
CDY53272	Canola	plastid	20.06	45.86
CDY45906	Canola	cytosol	27.02	43.5
CDY22593	Canola	plastid	43.73	38.2
CDY12257	Canola	plastid	43.73	38.2
CDY43012	Canola	plastid	44.85	37.35

Protein Annotations

EnsemblPlants:CDY03421	EnsemblPlantsGene:GSBRNA2T00116070001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
ncoils:Coil	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	ProteinID:CDY03421	ProteinID:CDY03421.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EE3FA2	MapMan:35.2	:	:

Description

BnaC01g16610D

Coordinates

chrLK031943:+:367713..369869

Molecular Weight (calculated)

41136.3 Da

IEP (calculated)

8.970

GRAVY (calculated)

-0.550

Length

359 amino acids

Sequence
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKIIRDEAT ELLLMDPFPH RENVDVLRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPSEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY SVKRTYWFDI YKNIDKISLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGG CEHPSRHSVD APKKSKDGRE
301: KPRKSVDRLN HIERPEKLKI PFEEMERSRR SVDIYRDKSQ PMERARKSVD WLDRNRINE

Best Arabidopsis Sequence Match ( AT4G24760.1 )
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.