CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98113	Canola	plastid	98.9	98.63
Bra019712.1-P	Field mustard	cytosol	70.52	95.52
AT1G13610.1	Thale cress	plastid	79.61	80.73
CDY37505	Canola	cytosol, extracellular	13.22	71.64
CDY31930	Canola	cytosol	11.02	62.5
VIT_01s0010g00670.t01	Wine grape	plastid	65.29	62.37
CDY37504	Canola	cytosol	12.95	61.84
CDY20302	Canola	cytosol	42.98	59.09
GSMUA_Achr9P22720_001	Banana	plastid	16.53	58.82
CDX91066	Canola	plastid	52.62	58.23
OQU76743	Sorghum	cytosol, mitochondrion	50.69	58.23
GSMUA_Achr10P...	Banana	plastid	56.75	58.19
CDY51485	Canola	cytosol	46.01	56.8
CDY28238	Canola	cytosol	46.01	56.8
CDY13406	Canola	cytosol	46.01	56.8
CDX72285	Canola	cytosol	46.01	56.8
CDX68717	Canola	cytosol	46.01	56.8
CDY20301	Canola	cytosol	46.01	56.61
CDY23273	Canola	cytosol	45.73	56.46
CDY55247	Canola	cytosol	45.45	56.12
CDY34778	Canola	cytosol	45.18	55.78
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	58.95	55.58
CDY03421	Canola	cytosol	54.82	55.43
CDY46139	Canola	cytosol	38.02	54.76
CDY34308	Canola	cytosol	55.1	54.64
CDY32850	Canola	cytosol	51.24	54.07
TraesCS7D01G386800.1	Wheat	plastid	57.02	54.05
TraesCS7B01G293000.1	Wheat	plastid	56.75	53.79
TraesCS7A01G391300.1	Wheat	plastid	56.75	53.79
CDX69584	Canola	endoplasmic reticulum	54.55	53.51
CDX86348	Canola	cytosol, nucleus, plastid	56.2	53.4
CDY09851	Canola	plastid	54.27	53.24
CDX85290	Canola	cytosol, nucleus, plastid	55.92	53.14
CDY35777	Canola	cytosol	55.1	53.05
TraesCS6A01G170900.1	Wheat	plastid	57.3	52.53
Os02t0190800-01	Rice	plasma membrane	56.2	52.44
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	52.07	52.35
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	52.07	52.35
CDY27016	Canola	plastid	49.31	52.34
CDY51065	Canola	plastid	49.59	52.33
TraesCS6B01G199000.1	Wheat	plastid	56.75	52.28
TraesCS6D01G160600.1	Wheat	plastid	56.75	52.28
HORVU6Hr1G034870.2	Barley	plastid	57.3	52.13
CDX85599	Canola	cytosol	36.91	51.34
CDX77081	Canola	plastid	29.75	51.18
EES06425	Sorghum	plastid	57.02	50.61
HORVU7Hr1G092460.1	Barley	plastid	57.02	49.88
Zm00001d046660_P001	Maize	plastid	57.3	49.41
Solyc05g010680.1.1	Tomato	cytosol	50.69	48.04
Zm00001d015656_P001	Maize	plastid	57.02	47.92
PGSC0003DMT400050553	Potato	cytosol	48.21	47.17
TraesCS7B01G196600.1	Wheat	cytosol	52.62	46.59
TraesCS7D01G284300.3	Wheat	cytosol	52.62	46.59
KXG25721	Sorghum	cytosol	52.07	45.87
CDX92650	Canola	cytosol	54.55	45.62
CDY35552	Canola	plastid	42.98	44.7
Zm00001d052810_P001	Maize	cytosol	50.96	44.26
CDY11031	Canola	cytosol, plastid	28.65	43.51
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	53.17	43.18
Zm00001d053705_P001	Maize	cytosol	25.62	43.06
Zm00001d012172_P001	Maize	mitochondrion	27.55	42.73
CDY45906	Canola	cytosol	23.14	37.67
CDY12257	Canola	plastid	42.42	37.47
CDY22593	Canola	plastid	42.15	37.23
CDY43012	Canola	plastid	43.25	36.43
CDY53272	Canola	plastid	15.7	36.31

Protein Annotations

EnsemblPlants:CDY56180	EnsemblPlantsGene:GSBRNA2T00017955001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF77	PFAM:PF12146	ProteinID:CDY56180	ProteinID:CDY56180.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EE29AC	UniProt:A0A078J268	MapMan:35.2	:	:

Description

BnaC05g49390DBnaC05g49390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J268]

Coordinates

chrLK033466:+:48204..50368

Molecular Weight (calculated)

41338.6 Da

IEP (calculated)

9.072

GRAVY (calculated)

-0.494

Length

363 amino acids

Sequence
(BLAST)

001: MGTATSTMAA KLAFFPPNPP SYTVVTDEST GKMRISAEMM RHRRDEEIEV VKIMTRRGNE IVGMYIKHPT AKLTVLYSHG NATDIGQMFI IYNELSHHLN
101: VNLMGYDYSG YGRSSGKPSE QETYADIEAA YNWLRETCGT KDERIILYGQ SVGSGPSLEL ASRLPRLRAL VLHSPFLSGL RVMYHVKHSF WFDIFKNIEK
201: IQLVDCPVLV IHGTDDKVVD ISHGKQLWEL SKEKYEPLWL NGGSHCNLEM FPEYLPHLRK FIGAIEKLPV PQFRRHSVSD DHKKDKQQLD PKKSSWIGSR
301: HSMECVTSRD NSRKMSIGHR SGKARNSTDS FDRARNSFDR LGEMVRSVRL CNVDCVKNAV AEA

Best Arabidopsis Sequence Match ( AT1G13610.1 )
(BLAST)

001: MGIATSTMAA KLAFFPPNPP SYTVVTEEST GKMMISTNLP HYLRDENIEV VKIRTKRGNE IVAMYVKNPT AKLTVLFSHG NASDLAQIFY ILAELIQLNV
101: NLMGYDYSGY GQSSGKPSEQ DTYADIEAAY NWLRQTYGTK DERIILYGQS VGSGPSLELA SRLPRLRALV LHSPFLSGLR VMYPVKHSFP FDIYKNIDKI
201: HLVECPVLVI HGTDDDVVNI SHGKHLWGLC KEKYEPLWLK GRGHSDIEMS PEYLPHLRKF ISAIEKLPVP KFRRQSLAND HKNDKSTKSS WIGSRHSIEC
301: VPPRDKSRKI SIDHRFGKPR NSVGSSDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.